RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
PTPN23-206ENST00000602307 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
PTPN23-206ENST00000602307 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
PTPN23-206ENST00000602307 ATF2P15336 505 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 EIF4A3P38919 411 aaKnown RBP13.16□□□□□ -0.3
PTPN23-206ENST00000602307 KCTD2Q14681 263 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 LMNB1P20700 586 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 GRAPQ13588 217 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 PHLDB2Q86SQ0 1253 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
PTPN23-206ENST00000602307 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 NACC1Q96RE7 527 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 RWDD2AQ9UIY3 292 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 DMTNQ08495 405 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 NME8Q8N427 588 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
PTPN23-206ENST00000602307 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 MOCS3O95396 460 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 IFNAR2P48551 515 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 ADCY1Q08828 1119 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
PTPN23-206ENST00000602307 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
PTPN23-206ENST00000602307 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
PTPN23-206ENST00000602307 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
PTPN23-206ENST00000602307 SAT1P21673 171 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 KLHL14Q9P2G3 628 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 MAD1L1Q9Y6D9 718 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 CAPN7Q9Y6W3 813 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 H7C0C1 242 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
PTPN23-206ENST00000602307 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTPN23-206ENST00000602307 GAP43P17677 238 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 ATP5OP48047 213 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 SNX1Q13596 522 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 NEDD4P46934 1319 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 NMT2O60551 498 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
PTPN23-206ENST00000602307 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
PTPN23-206ENST00000602307 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 GBP1P32455 592 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 PHBP35232 272 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.31
PTPN23-206ENST00000602307 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.31
PTPN23-206ENST00000602307 BRINP3Q76B58 766 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 AFAP1L2Q8N4X5 818 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.31
PTPN23-206ENST00000602307 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 ACCSQ96QU6 501 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 PASKQ96RG2 1323 aa13.15□□□□□ -0.31
PTPN23-206ENST00000602307 TXNDC9O14530 226 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 PLTPP55058 493 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 ZBED6P86452 979 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 C2orf54Q08AI8 447 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 Q3C1V9 767 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 ARHGAP24Q8N264 748 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 NDST4Q9H3R1 872 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 BPIFB4P59827 614 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 TFAMQ00059 246 aaKnown RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 ITKQ08881 620 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 KRT31Q15323 416 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 UBE2TQ9NPD8 197 aaPredicted RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 MED4Q9NPJ6 270 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 NDUFA10O95299 355 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 MAPK4P31152 587 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 DDIT3P35638 169 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 OSTNP61366 133 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 CUL4BQ13620 913 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms