RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
UPF1-213ENST00000601981 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 NAP1L4Q99733 375 aaKnown RBP11.44□□□□□ -0.58
UPF1-213ENST00000601981 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 FOXP1Q9H334 677 aaPredicted RBP11.44□□□□□ -0.58
UPF1-213ENST00000601981 GJB4Q9NTQ9 266 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
UPF1-213ENST00000601981 TFIP11Q9UBB9 837 aaKnown RBP11.44□□□□□ -0.58
UPF1-213ENST00000601981 DDX20Q9UHI6 824 aaKnown RBP11.44□□□□□ -0.58
UPF1-213ENST00000601981 HTTP42858 3142 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 YEATS4O95619 227 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 GJB1P08034 283 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 ZNF865P0CJ78 1059 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 CCND3P30281 292 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 NASPP49321 788 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 ARHGAP4P98171 946 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 SETQ01105 290 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 MTFR1Q15390 333 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 CCDC144BQ3MJ40 725 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 BRDTQ58F21 947 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 SEPT14Q6ZU15 432 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 PGBD1Q96JS3 809 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 WDR11Q9BZH6 1224 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 PAK6Q9NQU5 681 aaPredicted RBP11.43□□□□□ -0.58
UPF1-213ENST00000601981 TMEM63CQ9P1W3 806 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 TCHHQ07283 1943 aa11.43□□□□□ -0.58
UPF1-213ENST00000601981 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 MAFGO15525 162 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 DUSP11O75319 330 aaKnown RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 CYP3A4P08684 503 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 TXNP10599 105 aaKnown RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 TGFB3P10600 412 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 USP11P51784 963 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 SOX10P56693 466 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 CCDC183Q5T5S1 534 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 NOSTRINQ8IVI9 506 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 TRPV1Q8NER1 839 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 GPRASP2Q96D09 838 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 SHISA4Q96DD7 197 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 INPP4AQ96PE3 977 aaPredicted RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 DEFB118Q96PH6 123 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 AP5M1Q9H0R1 490 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 TCEAL9Q9UHQ7 104 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 NOL7Q9UMY1 257 aaKnown RBP11.42□□□□□ -0.58
UPF1-213ENST00000601981 Q9Y3F1 56 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 DOCK5Q9H7D0 1870 aa11.42□□□□□ -0.58
UPF1-213ENST00000601981 RBM47A0AV96 593 aaKnown RBP11.41□□□□□ -0.58
UPF1-213ENST00000601981 M0R2N6 131 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 ZEB2O60315 1214 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
UPF1-213ENST00000601981 TFRCP02786 760 aaKnown RBP11.41□□□□□ -0.58
UPF1-213ENST00000601981 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
UPF1-213ENST00000601981 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 MTMR1Q13613 665 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 NEDD9Q14511 834 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 NPY5RQ15761 445 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 CEP55Q53EZ4 464 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 TAPT1Q6NXT6 567 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 MOXD1Q6UVY6 613 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 PIK3AP1Q6ZUJ8 805 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 NIPA1Q7RTP0 329 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 RNF180Q86T96 592 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
UPF1-213ENST00000601981 MXRA8Q9BRK3 442 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 XPNPEP3Q9NQH7 507 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 CENPFP49454 3210 aa11.41□□□□□ -0.58
UPF1-213ENST00000601981 BTBD18B2RXH4 712 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 KBTBD13C9JR72 458 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 SGPL1O95470 568 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 GH1P01241 217 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 ICAM3P32942 547 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 CIITAP33076 1130 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 GJA8P48165 433 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 MRPS9P82933 396 aaKnown RBP11.4□□□□□ -0.58
UPF1-213ENST00000601981 NR5A1Q13285 461 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 STK38Q15208 465 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 INF2Q27J81 1249 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 PLA2G4DQ86XP0 818 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 LINC00301Q8NCQ3 95 aa11.4□□□□□ -0.58
UPF1-213ENST00000601981 OR6J1Q8NGC5 347 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms