RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MRE11P49959 708 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 MRPS9P82933 396 aaKnown RBP20.24■□□□□ 0.83
VRK3-225ENST00000601912 Q3C1V9 767 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 LRCH2Q5VUJ6 765 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
VRK3-225ENST00000601912 SHCBP1Q8NEM2 672 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 ERMNQ8TAM6 284 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 SLC5A5Q92911 643 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
VRK3-225ENST00000601912 MMTAG2Q9BU76 263 aaKnown RBP20.24■□□□□ 0.83
VRK3-225ENST00000601912 TOMM70O94826 608 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 SMC2O95347 1197 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 AFMP43652 599 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 MTMR1Q13613 665 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 STX1AQ16623 288 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 HAUS3Q68CZ6 603 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 VSIG10LQ86VR7 867 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 ZFP91Q96JP5 570 aaPredicted RBP20.23■□□□□ 0.83
VRK3-225ENST00000601912 PTPN18Q99952 460 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 GRPEL1Q9HAV7 217 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 MAGEF1Q9HAY2 307 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 KCNH7Q9NS40 1196 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 ANO10Q9NW15 660 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 ADD3Q9UEY8 706 aaKnown RBP20.23■□□□□ 0.83
VRK3-225ENST00000601912 KDM3AQ9Y4C1 1321 aa20.23■□□□□ 0.83
VRK3-225ENST00000601912 POTEB2H3BUK9 544 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 IPO5O00410 1097 aaKnown RBP20.22■□□□□ 0.83
VRK3-225ENST00000601912 FOXN1O15353 648 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 GAS7O60861 476 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 STAM2O75886 525 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 CAVIN2O95810 425 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 ARP10275 920 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 PLCG1P19174 1290 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 KCTD2Q14681 263 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 SH3RF1Q7Z6J0 888 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 CCDC102AQ96A19 550 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 PLIN2Q99541 437 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 RIT2Q99578 217 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 WDR11Q9BZH6 1224 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 NT5C3AQ9H0P0 336 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 TUBE1Q9UJT0 475 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 ABT1Q9ULW3 272 aaKnown RBP20.22■□□□□ 0.83
VRK3-225ENST00000601912 PSMD10O75832 226 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 SLC10A3P09131 477 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 CCT6AP40227 531 aaKnown RBP20.22■□□□□ 0.83
VRK3-225ENST00000601912 INHBEP58166 350 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 SPIRE1Q08AE8 756 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 WDR78Q5VTH9 848 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 NCAPH2Q6IBW4 605 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 ANKRD13CQ8N6S4 541 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 RBSNQ9H1K0 784 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
VRK3-225ENST00000601912 STK17AQ9UEE5 414 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 VAV3Q9UKW4 847 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 PCDHA5Q9Y5H7 936 aa20.22■□□□□ 0.83
VRK3-225ENST00000601912 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 B4DLN1 442 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 MAFGO15525 162 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 FCER1AP12319 257 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 NAALADL2Q58DX5 795 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 GRAMD1CQ8IYS0 662 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 MMP19Q99542 508 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 MPHOSPH6Q99547 160 aaKnown RBP20.21■□□□□ 0.83
VRK3-225ENST00000601912 TEKT3Q9BXF9 490 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 MORF4L1Q9UBU8 362 aa20.21■□□□□ 0.83
VRK3-225ENST00000601912 MYL1P05976 194 aa20.2■□□□□ 0.82
VRK3-225ENST00000601912 GRB10Q13322 594 aa20.2■□□□□ 0.82
VRK3-225ENST00000601912 PPP2R5CQ13362 524 aa20.2■□□□□ 0.82
VRK3-225ENST00000601912 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.82
VRK3-225ENST00000601912 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
VRK3-225ENST00000601912 AGO4Q9HCK5 861 aaKnown RBP20.2■□□□□ 0.82
VRK3-225ENST00000601912 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
VRK3-225ENST00000601912 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 NLRP12P59046 1061 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 AMPD3Q01432 767 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 STXBP2Q15833 593 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 GNPTABQ3T906 1256 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 HYIQ5T013 277 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 NT5DC1Q5TFE4 455 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 HHIPL1Q96JK4 782 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 PNMA5Q96PV4 448 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 NUDT12Q9BQG2 462 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 BIN1O00499 593 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 ALDH5A1P51649 535 aaPredicted RBP20.19■□□□□ 0.82
VRK3-225ENST00000601912 TMEM119Q4V9L6 283 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 INPP4AQ96PE3 977 aaPredicted RBP20.19■□□□□ 0.82
VRK3-225ENST00000601912 NAT10Q9H0A0 1025 aaKnown RBP20.19■□□□□ 0.82
VRK3-225ENST00000601912 KBTBD4Q9NVX7 518 aa20.19■□□□□ 0.82
VRK3-225ENST00000601912 RPA1P27694 616 aa20.18■□□□□ 0.82
VRK3-225ENST00000601912 SARSP49591 514 aaKnown RBP20.18■□□□□ 0.82
VRK3-225ENST00000601912 FSTL1Q12841 308 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms