RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
USE1-210ENST00000601662 EDNRBP24530 442 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 BEX3Q00994 111 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 NR5A1Q13285 461 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 NONOQ15233 471 aaKnown RBP eCLIP16.45■□□□□ 0.22
USE1-210ENST00000601662 PWP2Q15269 919 aaKnown RBP16.45■□□□□ 0.22
USE1-210ENST00000601662 KCNA10Q16322 511 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 SEPT14Q6ZU15 432 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 TNFRSF25Q93038 417 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 VTI1AQ96AJ9 217 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 ZNF396Q96N95 335 aaPredicted RBP16.45■□□□□ 0.22
USE1-210ENST00000601662 WDR11Q9BZH6 1224 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 ZMYND8Q9ULU4 1186 aaPredicted RBP16.45■□□□□ 0.22
USE1-210ENST00000601662 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
USE1-210ENST00000601662 NR3C2P08235 984 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 TRAPPC10P48553 1259 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 GJA9P57773 515 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 STXBP2Q15833 593 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 SLC39A5Q6ZMH5 540 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 TLK2Q86UE8 772 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 KLHDC9Q8NEP7 349 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
USE1-210ENST00000601662 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 PCDH10Q9P2E7 1040 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
USE1-210ENST00000601662 ATP11BQ9Y2G3 1177 aa16.44■□□□□ 0.22
USE1-210ENST00000601662 KIF28PB7ZC32 967 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 TXNP10599 105 aaKnown RBP16.43■□□□□ 0.22
USE1-210ENST00000601662 SYN1P17600 705 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 ACLYP53396 1101 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 UBE2SQ16763 222 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 COPS5Q92905 334 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 NAP1L4Q99733 375 aaKnown RBP16.43■□□□□ 0.22
USE1-210ENST00000601662 TSEN34Q9BSV6 310 aaKnown RBP16.43■□□□□ 0.22
USE1-210ENST00000601662 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
USE1-210ENST00000601662 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
USE1-210ENST00000601662 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
USE1-210ENST00000601662 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 RBM47A0AV96 593 aaKnown RBP16.42■□□□□ 0.22
USE1-210ENST00000601662 ASGR1P07306 291 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 USP11P51784 963 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 RTP1P59025 263 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
USE1-210ENST00000601662 DUSP28Q4G0W2 176 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 PCSK9Q8NBP7 692 aaKnown RBP16.42■□□□□ 0.22
USE1-210ENST00000601662 RASGRP4Q8TDF6 673 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
USE1-210ENST00000601662 PDCD2LQ9BRP1 358 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 STARD7Q9NQZ5 370 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
USE1-210ENST00000601662 ALPK3Q96L96 1907 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 CTAGE5O15320 804 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 ARIH2O95376 493 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 TRIM60Q495X7 471 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 CCSAPQ6IQ19 270 aaPredicted RBP16.41■□□□□ 0.22
USE1-210ENST00000601662 OR6J1Q8NGC5 347 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
USE1-210ENST00000601662 MOXD2PA6NHM9 499 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 ADAMTS3O15072 1205 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 EIF3JO75822 258 aaKnown RBP16.4■□□□□ 0.22
USE1-210ENST00000601662 BMP15O95972 392 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
USE1-210ENST00000601662 CCND2P30279 289 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 KRT85P78386 507 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 ORC2Q13416 577 aaPredicted RBP16.4■□□□□ 0.22
USE1-210ENST00000601662 PGM5Q15124 567 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 LY6KQ17RY6 165 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 CXCL17Q6UXB2 119 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 NEK8Q86SG6 692 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 GLT1D1Q96MS3 346 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 Q9Y3F1 56 aa16.4■□□□□ 0.22
USE1-210ENST00000601662 LRRC37A2A6NM11 1700 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 ZEB2O60315 1214 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 SORBS3O60504 671 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
USE1-210ENST00000601662 MYL3P08590 195 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 CYP3A4P08684 503 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
USE1-210ENST00000601662 SREBF1P36956 1147 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 INF2Q27J81 1249 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 EARS2Q5JPH6 523 aaKnown RBP16.39■□□□□ 0.21
USE1-210ENST00000601662 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
USE1-210ENST00000601662 SCAND2PQ9GZW5 306 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms