RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ARP10275 920 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 CDC25BP30305 580 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 KCNB1Q14721 858 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 CT47A1Q5JQC4 288 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-218ENST00000600383 TREML2Q5T2D2 321 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 CATSPER3Q86XQ3 398 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 MEIS1O00470 390 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 IRF6O14896 467 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 RHOBTB3O94955 611 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 IDEP14735 1019 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
HIF3A-218ENST00000600383 CYP4A11Q02928 519 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 TMEM132BQ14DG7 1078 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 SPATA1Q5VX52 437 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 GADL1Q6ZQY3 521 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
HIF3A-218ENST00000600383 ZNF577Q9BSK1 485 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 PKD2L1Q9P0L9 805 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 IQCA1LA6NCM1 817 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 FCER1AP12319 257 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 PAK1Q13153 545 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 POTEGQ6S5H5 508 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 POTEEQ6S8J3 1075 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 ANKRD13AQ8IZ07 590 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 IL31RAQ8NI17 732 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 DDX12PQ92771 950 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
HIF3A-218ENST00000600383 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 GAS7O60861 476 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 MYCLP12524 364 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-218ENST00000600383 STK4Q13043 487 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-218ENST00000600383 PTPN21Q16825 1174 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 OTOP1Q7RTM1 612 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 GIMAP8Q8ND71 665 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-218ENST00000600383 RMDN3Q96TC7 470 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 MXRA8Q9BRK3 442 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 WDR11Q9BZH6 1224 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 VAV3Q9UKW4 847 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 ZNF214Q9UL59 606 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-218ENST00000600383 ADAMTS5Q9UNA0 930 aa16.96■□□□□ 0.31
HIF3A-218ENST00000600383 SPDYE16A6NNV3 312 aaPredicted RBP16.96■□□□□ 0.3
HIF3A-218ENST00000600383 EML1O00423 815 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 PEX10O60683 326 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 ITGB5P18084 799 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 HYIQ5T013 277 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 REPS2Q8NFH8 660 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 SLC39A2Q9NP94 309 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.3
HIF3A-218ENST00000600383 RGL1Q9NZL6 768 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 RWDD2AQ9UIY3 292 aa16.96■□□□□ 0.3
HIF3A-218ENST00000600383 DDX39AO00148 427 aaKnown RBP16.95■□□□□ 0.3
HIF3A-218ENST00000600383 TPM3P06753 285 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 PLA2G4BP0C869 781 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 SPATA31C1P0DKV0 1188 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 ZNF18P17022 549 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 RPA1P27694 616 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 PSMC6P62333 389 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 RAD51AP2Q09MP3 1159 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 STIM1Q13586 685 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 ARHGEF16Q5VV41 709 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 TMC6Q7Z403 805 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 ADSSL1Q8N142 457 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 SLC5A5Q92911 643 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 ZNF408Q9H9D4 720 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 BMP2KQ9NSY1 1161 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-218ENST00000600383 RABGAP1Q9Y3P9 1069 aa16.95■□□□□ 0.3
HIF3A-218ENST00000600383 TRIM49BA6NDI0 452 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 IPO5O00410 1097 aaKnown RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 CBFA2T2O43439 604 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 PSMD10O75832 226 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 PPATQ06203 517 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 EIF2AK1Q9BQI3 630 aaKnown RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 KCNF1Q9H3M0 494 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 KCNH7Q9NS40 1196 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 OAZ1P54368 228 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 SETQ01105 290 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 LRMPQ12912 555 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 ARID5BQ14865 1188 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 CNNM4Q6P4Q7 775 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms