RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MLXIPQ9HAP2 919 aa25.95■■□□□ 1.74
CCDC9-204ENST00000599398 ZSWIM6Q9HCJ5 1215 aa25.95■■□□□ 1.74
CCDC9-204ENST00000599398 LAMA2P24043 3122 aaKnown RBP25.95■■□□□ 1.74
CCDC9-204ENST00000599398 SUPT20HL2P0C7V6 817 aa25.94■■□□□ 1.74
CCDC9-204ENST00000599398 PPP1R18Q6NYC8 613 aa25.94■■□□□ 1.74
CCDC9-204ENST00000599398 XRRA1Q6P2D8 792 aa25.94■■□□□ 1.74
CCDC9-204ENST00000599398 hCG_1984214I3L0E3 225 aa25.93■■□□□ 1.74
CCDC9-204ENST00000599398 CSF2RAP15509 400 aa25.93■■□□□ 1.74
CCDC9-204ENST00000599398 PPIGQ13427 754 aaKnown RBP eCLIP25.93■■□□□ 1.747e-8■□□□□ 10.7
CCDC9-204ENST00000599398 TYW1BQ6NUM6 668 aa25.93■■□□□ 1.74
CCDC9-204ENST00000599398 ZNF713Q8N859 430 aaPredicted RBP25.93■■□□□ 1.74
CCDC9-204ENST00000599398 UPF3BQ9BZI7 483 aaKnown RBP25.93■■□□□ 1.74
CCDC9-204ENST00000599398 PCDHA6Q9UN73 950 aa25.93■■□□□ 1.74
CCDC9-204ENST00000599398 PCDHA8Q9Y5H6 950 aa25.93■■□□□ 1.74
CCDC9-204ENST00000599398 UMODL1Q5DID0 1318 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 DOCK5Q9H7D0 1870 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 STXBP3O00186 592 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 FIBPO43427 364 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 ZNF286BP0CG31 522 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 CYP2C9P11712 490 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 ICAM3P32942 547 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 ADCY7P51828 1080 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 HSDL1Q3SXM5 330 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 NLRX1Q86UT6 975 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 KAT2BQ92831 832 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 RNPC3Q96LT9 517 aaKnown RBP25.92■■□□□ 1.74
CCDC9-204ENST00000599398 NOC4LQ9BVI4 516 aaKnown RBP25.92■■□□□ 1.74
CCDC9-204ENST00000599398 TM6SF1Q9BZW5 370 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 EHMT1Q9H9B1 1298 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 RIC8AQ9NPQ8 531 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 BARHL2Q9NY43 387 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 NOD1Q9Y239 953 aa25.92■■□□□ 1.74
CCDC9-204ENST00000599398 SMCO2A6NFE2 343 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 SPATA31C2B4DYI2 1134 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 CCL23P55773 120 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 PTPN11Q06124 597 aaPredicted RBP25.91■■□□□ 1.74
CCDC9-204ENST00000599398 NEDD9Q14511 834 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 ALG1Q9BT22 464 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 KATNAL1Q9BW62 490 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 NID2Q14112 1375 aa25.91■■□□□ 1.74
CCDC9-204ENST00000599398 NOP56O00567 594 aaKnown RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 PPFIA4O75335 1185 aa25.9■■□□□ 1.74
CCDC9-204ENST00000599398 PDIA3P30101 505 aaKnown RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 PSEN2P49810 448 aa25.9■■□□□ 1.74
CCDC9-204ENST00000599398 CCT2P78371 535 aaKnown RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 AKAP17AQ02040 695 aaKnown RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 SEMA3FQ13275 785 aa25.9■■□□□ 1.74
CCDC9-204ENST00000599398 TOB2Q14106 344 aaPredicted RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 PFKFB3Q16875 520 aaPredicted RBP25.9■■□□□ 1.74
CCDC9-204ENST00000599398 CYFIP1Q7L576 1253 aa25.9■■□□□ 1.74
CCDC9-204ENST00000599398 BCAS3Q9H6U6 928 aa25.9■■□□□ 1.74
CCDC9-204ENST00000599398 SCG2P13521 617 aa25.89■■□□□ 1.74
CCDC9-204ENST00000599398 MFSD10Q14728 455 aa25.89■■□□□ 1.74
CCDC9-204ENST00000599398 PHKBQ93100 1093 aa25.89■■□□□ 1.74
CCDC9-204ENST00000599398 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.89■■□□□ 1.745e-10■■■□□ 15.1
CCDC9-204ENST00000599398 NCOA5Q9HCD5 579 aaKnown RBP25.89■■□□□ 1.74
CCDC9-204ENST00000599398 PPFIA3O75145 1194 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 F2P00734 622 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 ACRP10323 421 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 PTGISQ16647 500 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 KIAA0753Q2KHM9 967 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 GPR153Q6NV75 609 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 C7orf31Q8N865 590 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 PGBD1Q96JS3 809 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 LARP6Q9BRS8 491 aaKnown RBP25.88■■□□□ 1.73
CCDC9-204ENST00000599398 GLT8D2Q9H1C3 349 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 WNT8AQ9H1J5 351 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 PDRG1Q9NUG6 133 aa25.88■■□□□ 1.73
CCDC9-204ENST00000599398 PRPF3O43395 683 aaKnown RBP25.87■■□□□ 1.73
CCDC9-204ENST00000599398 HOXD8P13378 290 aaPredicted RBP25.87■■□□□ 1.73
CCDC9-204ENST00000599398 EVCP57679 992 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 SP4Q02446 784 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 METTL7BQ6UX53 244 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 TEX2Q8IWB9 1127 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 GPRASP2Q96D09 838 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 CDHR1Q96JP9 859 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 SLC26A6Q9BXS9 759 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 IL23AQ9NPF7 189 aa25.87■■□□□ 1.73
CCDC9-204ENST00000599398 FOSP01100 380 aaPredicted RBP25.86■■□□□ 1.73
CCDC9-204ENST00000599398 ITGB5P18084 799 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 TMEM240Q5SV17 173 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 GDF6Q6KF10 455 aaPredicted RBP25.86■■□□□ 1.73
CCDC9-204ENST00000599398 PSRC1Q6PGN9 363 aaPredicted RBP25.86■■□□□ 1.73
CCDC9-204ENST00000599398 C16orf59Q7L2K0 433 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 SESTD1Q86VW0 696 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 CCDC12Q8WUD4 166 aaPredicted RBP25.86■■□□□ 1.73
CCDC9-204ENST00000599398 SCLYQ96I15 445 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 SENP7Q9BQF6 1050 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 ANO3Q9BYT9 981 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 TMEM260Q9NX78 707 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 HDAC6Q9UBN7 1215 aa25.86■■□□□ 1.73
CCDC9-204ENST00000599398 MTMR1Q13613 665 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 NTRK3Q16288 839 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 PKN1Q16512 942 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 ZNF365Q70YC5 407 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 Q7L0L9 218 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 DEFB123Q8N688 67 aa25.85■■□□□ 1.73
CCDC9-204ENST00000599398 GIMAP8Q8ND71 665 aaPredicted RBP25.85■■□□□ 1.73
CCDC9-204ENST00000599398 RNF26Q9BY78 433 aaPredicted RBP25.85■■□□□ 1.73
CCDC9-204ENST00000599398 PKD2L1Q9P0L9 805 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms