RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 IFNAR1P17181 557 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 NAPAP54920 295 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 UBE2SQ16763 222 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 NBPF20Q3BBV1 942 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 LRIT3Q3SXY7 679 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
VRK3-215ENST00000599138 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 PCDHA6Q9UN73 950 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 PCDHA8Q9Y5H6 950 aa11.14□□□□□ -0.63
VRK3-215ENST00000599138 DOCK5Q9H7D0 1870 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 SMCO2A6NFE2 343 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 FIBPO43427 364 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 B4GALT4O60513 344 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 SEC24BO95487 1268 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 GGPS1O95749 300 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 RAG1P15918 1043 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 ITGB5P18084 799 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 ADCY7P51828 1080 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 DGKDQ16760 1214 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 PHKBQ93100 1093 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 TRPV6Q9H1D0 765 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
VRK3-215ENST00000599138 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 UBIAD1Q9Y5Z9 338 aa11.13□□□□□ -0.63
VRK3-215ENST00000599138 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
VRK3-215ENST00000599138 MYO9BQ13459 2157 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 SPDYE3A6NKU9 549 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 HAS3O00219 553 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
VRK3-215ENST00000599138 F2P00734 622 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 EPHB4P54760 987 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 NEDD9Q14511 834 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 SPATA33Q96N06 139 aa11.12□□□□□ -0.63
VRK3-215ENST00000599138 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
VRK3-215ENST00000599138 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
VRK3-215ENST00000599138 ADAMTS3O15072 1205 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 MAFGO15525 162 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 KCNA2P16389 499 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 SREBF1P36956 1147 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 FPGSQ05932 587 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 C9orf50Q5SZB4 431 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 CTAGE1Q96RT6 745 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
VRK3-215ENST00000599138 C16orf70Q9BSU1 422 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 JADE2Q9NQC1 790 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
VRK3-215ENST00000599138 SORBS3O60504 671 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 PFKFB2O60825 505 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 ATP9AO75110 1047 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 ZNF286BP0CG31 522 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 CYP2C18P33260 490 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 PSEN2P49810 448 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 SHHQ15465 462 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 C16orf59Q7L2K0 433 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 CCDC12Q8WUD4 166 aaPredicted RBP11.1□□□□□ -0.63
VRK3-215ENST00000599138 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 GPR20Q99678 358 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 HIPK3Q9H422 1215 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 TMEM260Q9NX78 707 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 TELO2Q9Y4R8 837 aa11.1□□□□□ -0.63
VRK3-215ENST00000599138 UMODL1Q5DID0 1318 aa11.09□□□□□ -0.63
VRK3-215ENST00000599138 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
VRK3-215ENST00000599138 MEIS1O00470 390 aa11.09□□□□□ -0.63
VRK3-215ENST00000599138 CYP3A4P08684 503 aa11.09□□□□□ -0.63
VRK3-215ENST00000599138 CYP2C9P11712 490 aa11.09□□□□□ -0.63
VRK3-215ENST00000599138 CSF2RAP15509 400 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms