RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 RWDD3Q9Y3V2 267 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TENM4Q6N022 2769 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 DMXL2Q8TDJ6 3036 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 ASB14A6NK59 587 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 USP17L12C9JPN9 530 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 USP17L21D6R901 530 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 C5orf67F2Z3F1 127 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 SPTLC1O15269 473 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 ZBED4O75132 1171 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 POLR3DP05423 398 aaPredicted RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 ITGB1P05556 798 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 MMP3P08254 477 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 NBPF7P0C2Y1 421 aaPredicted RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 TGM1P22735 817 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 CA8P35219 290 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 THPOP40225 353 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 DYNLL1P63167 89 aaKnown RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 PDE4BQ07343 736 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 COL28A1Q2UY09 1125 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 TWISTNBQ3B726 338 aaPredicted RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 PAN2Q504Q3 1202 aaKnown RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 FAM83BQ5T0W9 1011 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 ANKRD54Q6NXT1 300 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 PI16Q6UXB8 463 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 TTC6Q86TZ1 520 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 KLHL23Q8NBE8 558 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 VN1R2Q8NFZ6 395 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 SPATA18Q8TC71 538 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 SEPT8Q92599 483 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 DHX38Q92620 1227 aaKnown RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 TSR2Q969E8 191 aaKnown RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 KAZALD1Q96I82 304 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 FGD4Q96M96 766 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 NEUROD6Q96NK8 337 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 S1PR5Q9H228 398 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 ZSWIM6Q9HCJ5 1215 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 PPP1R9AQ9ULJ8 1098 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 ISY1Q9ULR0 285 aaKnown RBP5.35□□□□□ -1.55
HERC3-213ENST00000598772 SRPK3Q9UPE1 567 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 Q9Y3F1 56 aa5.35□□□□□ -1.55
HERC3-213ENST00000598772 COL11A1P12107 1806 aaPredicted RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 PTPN13Q12923 2485 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 KRBA1A5PL33 1030 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 RSPH10B2B2RC85 870 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 ARHGAP6O43182 974 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 NARSO43776 548 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 KPNA6O60684 536 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 LRRN2O75325 713 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 TOP3BO95985 862 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 RSPH10BP0C881 870 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 ZNF853P0CG23 659 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SHMT1P34896 483 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 CALD1Q05682 793 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 PTPN11Q06124 597 aaPredicted RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 MBTPS1Q14703 1052 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 AASDHQ4L235 1098 aaPredicted RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 RARS2Q5T160 578 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 PSAPL1Q6NUJ1 521 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 TAPT1Q6NXT6 567 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 TSSK4Q6SA08 328 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 PLCD3Q8N3E9 789 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 GLIS3Q8NEA6 775 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 HNRNPLLQ8WVV9 542 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 KIFC2Q96AC6 838 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 RUNDC1Q96C34 613 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 NUP88Q99567 741 aaPredicted RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 LSM14BQ9BX40 385 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 ADAM33Q9BZ11 813 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SRCIN1Q9C0H9 1055 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SH2D4AQ9H788 454 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 VCPKMTQ9H867 229 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 CYP26B1Q9NR63 512 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SNRKQ9NRH2 765 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SEMA4GQ9NTN9 838 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 SMG1Q96Q15 3661 aaKnown RBP5.34□□□□□ -1.55
HERC3-213ENST00000598772 AKAP13Q12802 2813 aa5.34□□□□□ -1.55
HERC3-213ENST00000598772 MICAL3Q7RTP6 2002 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 ABCA12Q86UK0 2595 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 NLRC5Q86WI3 1866 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 RAD50Q92878 1312 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.33□□□□□ -1.56
HERC3-213ENST00000598772 KCNK5O95279 499 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 CTSHP09668 335 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 ICA1Q05084 483 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 CCDC6Q16204 474 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 DUSP6Q16828 381 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 DUSP28Q4G0W2 176 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 TPRNQ4KMQ1 711 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 PLPP4Q5VZY2 271 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 KANK3Q6NY19 840 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 RUFY4Q6ZNE9 571 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 PRR23CQ6ZRP0 262 aa5.33□□□□□ -1.56
HERC3-213ENST00000598772 CHST3Q7LGC8 479 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms