RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 INPP4AQ96PE3 977 aaPredicted RBP16.8■□□□□ 0.28
XRCC1-208ENST00000598422 RTEL1Q9NZ71 1219 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 hCG_1984214I3L0E3 225 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 ACRP10323 421 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 MRPS9P82933 396 aaKnown RBP16.79■□□□□ 0.28
XRCC1-208ENST00000598422 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
XRCC1-208ENST00000598422 NEDD9Q14511 834 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 MFSD10Q14728 455 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 ZNF713Q8N859 430 aaPredicted RBP16.79■□□□□ 0.28
XRCC1-208ENST00000598422 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.287e-7■□□□□ 8.9
XRCC1-208ENST00000598422 ALG1Q9BT22 464 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 IL23AQ9NPF7 189 aa16.79■□□□□ 0.28
XRCC1-208ENST00000598422 V9GY48 417 aaPredicted RBP16.79■□□□□ 0.28
XRCC1-208ENST00000598422 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 F2P00734 622 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 ICAM3P32942 547 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 PSEN2P49810 448 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 ADCY7P51828 1080 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 BFSP2Q13515 415 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 PTGISQ16647 500 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
XRCC1-208ENST00000598422 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 RETREG2Q8NC44 543 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 KAT2BQ92831 832 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
XRCC1-208ENST00000598422 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 HOXD8P13378 290 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-208ENST00000598422 CDC27P30260 824 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 AKAP17AQ02040 695 aaKnown RBP16.77■□□□□ 0.28
XRCC1-208ENST00000598422 SP2Q02086 613 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 FUT2Q10981 343 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 FAM109BQ6ICB4 259 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-208ENST00000598422 METTL7BQ6UX53 244 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 ZNF365Q70YC5 407 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 SESTD1Q86VW0 696 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 SCLYQ96I15 445 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 CDHR1Q96JP9 859 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 GLT8D2Q9H1C3 349 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.28
XRCC1-208ENST00000598422 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
XRCC1-208ENST00000598422 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
XRCC1-208ENST00000598422 PITPNM1O00562 1244 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
XRCC1-208ENST00000598422 SP4Q02446 784 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 CYFIP1Q7L576 1253 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 GIMAP8Q8ND71 665 aaPredicted RBP16.76■□□□□ 0.27
XRCC1-208ENST00000598422 GPRASP2Q96D09 838 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 FAM161BQ96MY7 647 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
XRCC1-208ENST00000598422 BARHL2Q9NY43 387 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 CYP46A1Q9Y6A2 500 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 MYH6P13533 1939 aa16.76■□□□□ 0.27
XRCC1-208ENST00000598422 STXBP3O00186 592 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 FGBP02675 491 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 PFKMP08237 780 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 MTMR1Q13613 665 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 GDF6Q6KF10 455 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-208ENST00000598422 RUFY3Q7L099 469 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 C16orf59Q7L2K0 433 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 CCDC12Q8WUD4 166 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-208ENST00000598422 SENP7Q9BQF6 1050 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 MTMR10Q9NXD2 777 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 HDAC6Q9UBN7 1215 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 GTF2IRD1Q9UHL9 959 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 ZNF215Q9UL58 517 aaPredicted RBP16.75■□□□□ 0.27
XRCC1-208ENST00000598422 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
XRCC1-208ENST00000598422 NID2Q14112 1375 aa16.75■□□□□ 0.27
XRCC1-208ENST00000598422 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 FOSP01100 380 aaPredicted RBP16.74■□□□□ 0.27
XRCC1-208ENST00000598422 LGALS2P05162 132 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 SCG2P13521 617 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 RFC2P35250 354 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 AP3B2Q13367 1082 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 PFKFB3Q16875 520 aaPredicted RBP16.74■□□□□ 0.27
XRCC1-208ENST00000598422 TYW1BQ6NUM6 668 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 OTOP2Q7RTS6 562 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 DEFB128Q7Z7B8 93 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 HERVK_113Q902F9 699 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 AGXT2Q9BYV1 514 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
XRCC1-208ENST00000598422 SZT2Q5T011 3432 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 ZBBXA8MT70 800 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms