RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 GJA10Q969M2 543 aa23.62■■□□□ 1.37
IRF3-214ENST00000596788 GPRASP2Q96D09 838 aa23.62■■□□□ 1.37
IRF3-214ENST00000596788 SYNGAP1Q96PV0 1343 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 PRPHP41219 470 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 ME1P48163 572 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 GRIN1Q05586 938 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 CSPP1Q1MSJ5 1256 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 ARL6IP4Q66PJ3 421 aaKnown RBP23.61■■□□□ 1.37
IRF3-214ENST00000596788 EEPD1Q7L9B9 569 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 NLRX1Q86UT6 975 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 MSL3Q8N5Y2 521 aaKnown RBP23.61■■□□□ 1.37
IRF3-214ENST00000596788 JMYQ8N9B5 988 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 TINF2Q9BSI4 451 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 AGO4Q9HCK5 861 aaKnown RBP23.61■■□□□ 1.37
IRF3-214ENST00000596788 KCNH7Q9NS40 1196 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.61■■□□□ 1.37
IRF3-214ENST00000596788 SRRDQ9UH36 339 aa23.61■■□□□ 1.37
IRF3-214ENST00000596788 TBX3O15119 743 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 SNAI1O95863 264 aaPredicted RBP23.6■■□□□ 1.37
IRF3-214ENST00000596788 IGHA2P01877 340 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 GNPTABQ3T906 1256 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 OLFML2BQ68BL8 750 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 KRI1Q8N9T8 703 aaKnown RBP23.6■■□□□ 1.37
IRF3-214ENST00000596788 SLC5A5Q92911 643 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 KATNBL1Q9H079 304 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 PCDHA7Q9UN72 937 aa23.6■■□□□ 1.37
IRF3-214ENST00000596788 XRCC5P13010 732 aaKnown RBP23.59■■□□□ 1.37
IRF3-214ENST00000596788 MCM4P33991 863 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 AXDND1Q5T1B0 1012 aaPredicted RBP23.59■■□□□ 1.37
IRF3-214ENST00000596788 SEPT14Q6ZU15 432 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 FERMT2Q96AC1 680 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 CLIC6Q96NY7 704 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 ZNF577Q9BSK1 485 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 PKD2L1Q9P0L9 805 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 SRPRBQ9Y5M8 271 aaKnown RBP23.59■■□□□ 1.37
IRF3-214ENST00000596788 CEP350Q5VT06 3117 aa23.59■■□□□ 1.37
IRF3-214ENST00000596788 VWA3AA6NCI4 1184 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 SPATA31C2B4DYI2 1134 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 PRPF40AO75400 957 aaKnown RBP23.58■■□□□ 1.37
IRF3-214ENST00000596788 GNRH1P01148 92 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 ICAM3P32942 547 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 TXKP42681 527 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 ITGB3BPQ13352 177 aaPredicted RBP23.58■■□□□ 1.37
IRF3-214ENST00000596788 SLFN12Q8IYM2 578 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 VTA1Q9NP79 307 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 PCNTO95613 3336 aa23.58■■□□□ 1.37
IRF3-214ENST00000596788 GOLGA6L22H0YM25 854 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 IPO5O00410 1097 aaKnown RBP23.57■■□□□ 1.36
IRF3-214ENST00000596788 MARCH6O60337 910 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 CUTAO60888 179 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 GADD45BO75293 160 aaPredicted RBP23.57■■□□□ 1.36
IRF3-214ENST00000596788 HOXD10P28358 340 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 DTHD1Q6ZMT9 781 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 TRIB2Q92519 343 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 CDHR1Q96JP9 859 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 LMBRD1Q9NUN5 540 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 VAV3Q9UKW4 847 aa23.57■■□□□ 1.36
IRF3-214ENST00000596788 ATP9AO75110 1047 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 PSMD10O75832 226 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 KCNA2P16389 499 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 CYP2C19P33261 490 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 FXR2P51116 673 aaKnown RBP eCLIP23.56■■□□□ 1.36
IRF3-214ENST00000596788 IRF5Q13568 498 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 LRCH2Q5VUJ6 765 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 CSRNP2Q9H175 543 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 TTC12Q9H892 705 aaPredicted RBP23.56■■□□□ 1.36
IRF3-214ENST00000596788 PDGFCQ9NRA1 345 aa23.56■■□□□ 1.36
IRF3-214ENST00000596788 MAFGO15525 162 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 DHX15O43143 795 aaKnown RBP23.55■■□□□ 1.36
IRF3-214ENST00000596788 ARIH2O95376 493 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 TECP42680 631 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 SPIRE1Q08AE8 756 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 ARHGEF6Q15052 776 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 TAPT1Q6NXT6 567 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 RIT2Q99578 217 aa23.55■■□□□ 1.36
IRF3-214ENST00000596788 POTEMA6NI47 508 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 DDX11L8A8MPP1 907 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 FOXN1O15353 648 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 GAS7O60861 476 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 HSPA8P11142 646 aaKnown RBP23.54■■□□□ 1.36
IRF3-214ENST00000596788 UBA1P22314 1058 aaKnown RBP23.54■■□□□ 1.36
IRF3-214ENST00000596788 SP2Q02086 613 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 TMEM266Q2M3C6 531 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 ADALQ6DHV7 355 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 SHC4Q6S5L8 630 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 OTOP1Q7RTM1 612 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 TEKT3Q9BXF9 490 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 ABHD16BQ9H3Z7 469 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 ZHX1Q9UKY1 873 aaPredicted RBP23.54■■□□□ 1.36
IRF3-214ENST00000596788 PCDHA12Q9UN75 941 aa23.54■■□□□ 1.36
IRF3-214ENST00000596788 RBM47A0AV96 593 aaKnown RBP23.53■■□□□ 1.36
IRF3-214ENST00000596788 PP2D1A8MPX8 630 aa23.53■■□□□ 1.36
IRF3-214ENST00000596788 DDX39AO00148 427 aaKnown RBP23.53■■□□□ 1.36
IRF3-214ENST00000596788 ELNP15502 786 aa23.53■■□□□ 1.36
IRF3-214ENST00000596788 LONP1P36776 959 aaKnown RBP23.53■■□□□ 1.36
IRF3-214ENST00000596788 ACVR2BQ13705 512 aa23.53■■□□□ 1.36
IRF3-214ENST00000596788 SPECC1Q5M775 1068 aa23.53■■□□□ 1.36
IRF3-214ENST00000596788 PRAMEF19Q5SWL8 479 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms