RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FUT2Q10981 343 aa15.05■□□□□ -0
LIG1-212ENST00000596549 LAMC2Q13753 1193 aa15.05■□□□□ -0
LIG1-212ENST00000596549 DGKDQ16760 1214 aa15.05■□□□□ -0
LIG1-212ENST00000596549 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
LIG1-212ENST00000596549 TYW1BQ6NUM6 668 aa15.05■□□□□ -0
LIG1-212ENST00000596549 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
LIG1-212ENST00000596549 HERVK_113Q902F9 699 aa15.05■□□□□ -0
LIG1-212ENST00000596549 DHX38Q92620 1227 aaKnown RBP15.05■□□□□ -0
LIG1-212ENST00000596549 SNX14Q9Y5W7 946 aa15.05■□□□□ -0
LIG1-212ENST00000596549 NID2Q14112 1375 aa15.05■□□□□ -0
LIG1-212ENST00000596549 MICAL3Q7RTP6 2002 aa15.04■□□□□ -0
LIG1-212ENST00000596549 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
LIG1-212ENST00000596549 ICAM3P32942 547 aa15.04■□□□□ -0
LIG1-212ENST00000596549 PBX2P40425 430 aa15.04■□□□□ -0
LIG1-212ENST00000596549 PSEN2P49810 448 aa15.04■□□□□ -0
LIG1-212ENST00000596549 CHMP4BP1P59074 171 aa15.04■□□□□ -0
LIG1-212ENST00000596549 KRT32Q14532 448 aa15.04■□□□□ -0
LIG1-212ENST00000596549 UBE2SQ16763 222 aa15.04■□□□□ -0
LIG1-212ENST00000596549 PCNX4Q63HM2 1172 aa15.04■□□□□ -0
LIG1-212ENST00000596549 WWC2Q6AWC2 1192 aa15.04■□□□□ -0
LIG1-212ENST00000596549 KCNV1Q6PIU1 500 aa15.04■□□□□ -0
LIG1-212ENST00000596549 SMARCC2Q8TAQ2 1214 aa15.04■□□□□ -0
LIG1-212ENST00000596549 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
LIG1-212ENST00000596549 GTF2IRD1Q9UHL9 959 aa15.04■□□□□ -0
LIG1-212ENST00000596549 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
LIG1-212ENST00000596549 TMEM265A0A087WTH1 108 aa15.03■□□□□ -0
LIG1-212ENST00000596549 KLF18A0A0U1RQI7 1052 aa15.03■□□□□ -0
LIG1-212ENST00000596549 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.03■□□□□ -0
LIG1-212ENST00000596549 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.03■□□□□ -0
LIG1-212ENST00000596549 PITPNM1O00562 1244 aa15.03■□□□□ -0
LIG1-212ENST00000596549 ZBTB43O43298 467 aa15.03■□□□□ -0
LIG1-212ENST00000596549 STAM2O75886 525 aa15.03■□□□□ -0
LIG1-212ENST00000596549 TGFB3P10600 412 aa15.03■□□□□ -0
LIG1-212ENST00000596549 CDC27P30260 824 aa15.03■□□□□ -0
LIG1-212ENST00000596549 HIC1Q14526 733 aa15.03■□□□□ -0
LIG1-212ENST00000596549 MFSD10Q14728 455 aa15.03■□□□□ -0
LIG1-212ENST00000596549 PTGISQ16647 500 aa15.03■□□□□ -0
LIG1-212ENST00000596549 RTN1Q16799 776 aa15.03■□□□□ -0
LIG1-212ENST00000596549 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
LIG1-212ENST00000596549 WNT8BQ93098 351 aa15.03■□□□□ -0
LIG1-212ENST00000596549 SPATA33Q96N06 139 aa15.03■□□□□ -0
LIG1-212ENST00000596549 C16orf70Q9BSU1 422 aa15.03■□□□□ -0
LIG1-212ENST00000596549 PBX4Q9BYU1 374 aa15.03■□□□□ -0
LIG1-212ENST00000596549 SEMA6BQ9H3T3 888 aa15.03■□□□□ -0
LIG1-212ENST00000596549 RBM28Q9NW13 759 aaKnown RBP15.03■□□□□ -0
LIG1-212ENST00000596549 RTEL1Q9NZ71 1219 aa15.03■□□□□ -0
LIG1-212ENST00000596549 HDAC6Q9UBN7 1215 aa15.03■□□□□ -0
LIG1-212ENST00000596549 WDR81Q562E7 1941 aa15.02■□□□□ -0
LIG1-212ENST00000596549 GOLGA8AA7E2F4 631 aa15.02■□□□□ -0
LIG1-212ENST00000596549 GOLGA8BA8MQT2 603 aa15.02■□□□□ -0
LIG1-212ENST00000596549 FIBPO43427 364 aa15.02■□□□□ -0
LIG1-212ENST00000596549 FGBP02675 491 aa15.02■□□□□ -0
LIG1-212ENST00000596549 IQCF3P0C7M6 154 aa15.02■□□□□ -0
LIG1-212ENST00000596549 RBL2Q08999 1139 aa15.02■□□□□ -0
LIG1-212ENST00000596549 KIAA0753Q2KHM9 967 aa15.02■□□□□ -0
LIG1-212ENST00000596549 GNPTABQ3T906 1256 aa15.02■□□□□ -0
LIG1-212ENST00000596549 HEATR3Q7Z4Q2 680 aa15.02■□□□□ -0
LIG1-212ENST00000596549 CUL5Q93034 780 aa15.02■□□□□ -0
LIG1-212ENST00000596549 JAKMIP1Q96N16 626 aaKnown RBP15.02■□□□□ -0
LIG1-212ENST00000596549 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
LIG1-212ENST00000596549 ALG1Q9BT22 464 aa15.02■□□□□ -0
LIG1-212ENST00000596549 KATNAL1Q9BW62 490 aa15.02■□□□□ -0
LIG1-212ENST00000596549 CHD9Q3L8U1 2897 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 LGALS2P05162 132 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 PFKMP08237 780 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 RCAN1P53805 252 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 GPNMBQ14956 572 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 METTL7BQ6UX53 244 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 SYNE3Q6ZMZ3 975 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 DEFB128Q7Z7B8 93 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 MYLIPQ8WY64 445 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 AGXT2Q9BYV1 514 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 PSTPIP2Q9H939 334 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 NOD1Q9Y239 953 aa15.01□□□□□ -0.01
LIG1-212ENST00000596549 STXBP3O00186 592 aa15□□□□□ -0.01
LIG1-212ENST00000596549 HMGB1P09429 215 aaKnown RBP15□□□□□ -0.01
LIG1-212ENST00000596549 ITGB5P18084 799 aa15□□□□□ -0.01
LIG1-212ENST00000596549 HOXC8P31273 242 aa15□□□□□ -0.01
LIG1-212ENST00000596549 ZNF200P98182 395 aaPredicted RBP15□□□□□ -0.01
LIG1-212ENST00000596549 TRIM71Q2Q1W2 868 aaKnown RBP15□□□□□ -0.01
LIG1-212ENST00000596549 PPP1R18Q6NYC8 613 aa15□□□□□ -0.01
LIG1-212ENST00000596549 TRAF7Q6Q0C0 670 aa15□□□□□ -0.01
LIG1-212ENST00000596549 Q6ZUG5 572 aa15□□□□□ -0.01
LIG1-212ENST00000596549 CYFIP1Q7L576 1253 aa15□□□□□ -0.01
LIG1-212ENST00000596549 TRIM50Q86XT4 487 aa15□□□□□ -0.01
LIG1-212ENST00000596549 C7orf31Q8N865 590 aa15□□□□□ -0.01
LIG1-212ENST00000596549 CAGE1Q8TC20 777 aa15□□□□□ -0.01
LIG1-212ENST00000596549 BRF1Q92994 677 aa15□□□□□ -0.01
LIG1-212ENST00000596549 TIFAQ96CG3 184 aa15□□□□□ -0.01
LIG1-212ENST00000596549 PGBD1Q96JS3 809 aa15□□□□□ -0.01
LIG1-212ENST00000596549 GPR20Q99678 358 aa15□□□□□ -0.01
LIG1-212ENST00000596549 MLXIPQ9HAP2 919 aa15□□□□□ -0.01
LIG1-212ENST00000596549 YBX2Q9Y2T7 364 aaKnown RBP15□□□□□ -0.01
LIG1-212ENST00000596549 KAT6AQ92794 2004 aa15□□□□□ -0.01
LIG1-212ENST00000596549 ATP9AO75110 1047 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 PPFIA4O75335 1185 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 NEFLP07196 543 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 KCNA2P16389 499 aa14.99□□□□□ -0.01
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