RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 UBA1P22314 1058 aaKnown RBP15□□□□□ -0.01
USE1-207ENST00000596136 SEMA3FQ13275 785 aa15□□□□□ -0.01
USE1-207ENST00000596136 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
USE1-207ENST00000596136 NTRK3Q16288 839 aa15□□□□□ -0.01
USE1-207ENST00000596136 C9orf50Q5SZB4 431 aa15□□□□□ -0.01
USE1-207ENST00000596136 SESTD1Q86VW0 696 aa15□□□□□ -0.01
USE1-207ENST00000596136 LRCH3Q96II8 777 aa15□□□□□ -0.01
USE1-207ENST00000596136 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
USE1-207ENST00000596136 SENP7Q9BQF6 1050 aa15□□□□□ -0.01
USE1-207ENST00000596136 NOC4LQ9BVI4 516 aaKnown RBP15□□□□□ -0.01
USE1-207ENST00000596136 RIC8AQ9NPQ8 531 aa15□□□□□ -0.01
USE1-207ENST00000596136 BARHL2Q9NY43 387 aa15□□□□□ -0.01
USE1-207ENST00000596136 CYP46A1Q9Y6A2 500 aa15□□□□□ -0.01
USE1-207ENST00000596136 HAS3O00219 553 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
USE1-207ENST00000596136 FIBPO43427 364 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 GGPS1O95749 300 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 PDIA3P30101 505 aaKnown RBP14.99□□□□□ -0.01
USE1-207ENST00000596136 PFKFB3Q16875 520 aaPredicted RBP14.99□□□□□ -0.01
USE1-207ENST00000596136 HSDL1Q3SXM5 330 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 IL17RAQ96F46 866 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 GLT8D2Q9H1C3 349 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 HIPK3Q9H422 1215 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
USE1-207ENST00000596136 F2P00734 622 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 FOSP01100 380 aaPredicted RBP14.98□□□□□ -0.01
USE1-207ENST00000596136 IFNAR1P17181 557 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 CYP2C18P33260 490 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
USE1-207ENST00000596136 NAPAP54920 295 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 ANAPC15P60006 121 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 PPIGQ13427 754 aaKnown RBP eCLIP14.98□□□□□ -0.018e-6■■■■□ 22.7
USE1-207ENST00000596136 NEDD9Q14511 834 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 PKN1Q16512 942 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 UBE2SQ16763 222 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 C16orf59Q7L2K0 433 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 TMEM199Q8N511 208 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 GPRASP2Q96D09 838 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 ZNF274Q96GC6 653 aaPredicted RBP14.98□□□□□ -0.01
USE1-207ENST00000596136 BCAS3Q9H6U6 928 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 TRMT13Q9NUP7 481 aaKnown RBP14.98□□□□□ -0.01
USE1-207ENST00000596136 RTEL1Q9NZ71 1219 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 UBIAD1Q9Y5Z9 338 aa14.98□□□□□ -0.01
USE1-207ENST00000596136 ESYT2A0FGR8 921 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 SMCO2A6NFE2 343 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 SPDYE3A6NKU9 549 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 SCG2P13521 617 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 CSF2RAP15509 400 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 ITGB5P18084 799 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 RASIP1Q5U651 963 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 NLRX1Q86UT6 975 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 SPATA33Q96N06 139 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 CTAGE1Q96RT6 745 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 MLXIPQ9HAP2 919 aa14.97□□□□□ -0.01
USE1-207ENST00000596136 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
USE1-207ENST00000596136 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 MAFGO15525 162 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
USE1-207ENST00000596136 PSEN2P49810 448 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 ADCY7P51828 1080 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 TMEM240Q5SV17 173 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 FAM109BQ6ICB4 259 aaPredicted RBP14.96□□□□□ -0.01
USE1-207ENST00000596136 GIMAP8Q8ND71 665 aaPredicted RBP14.96□□□□□ -0.01
USE1-207ENST00000596136 VWCEQ96DN2 955 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 CDHR1Q96JP9 859 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.96□□□□□ -0.01
USE1-207ENST00000596136 C16orf70Q9BSU1 422 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.01
USE1-207ENST00000596136 UPF3BQ9BZI7 483 aaKnown RBP14.96□□□□□ -0.01
USE1-207ENST00000596136 ZMYND12Q9H0C1 365 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 WNT8AQ9H1J5 351 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 EHMT1Q9H9B1 1298 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 IL23AQ9NPF7 189 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 GTF2IRD1Q9UHL9 959 aa14.96□□□□□ -0.01
USE1-207ENST00000596136 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 CYP2C9P11712 490 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 KCNA2P16389 499 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 SMAD3P84022 425 aaKnown RBP14.95□□□□□ -0.02
USE1-207ENST00000596136 AP3B2Q13367 1082 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 MFSD10Q14728 455 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 FAM47CQ5HY64 1035 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 CYFIP1Q7L576 1253 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 GPR20Q99678 358 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 JADE2Q9NQC1 790 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 DOCK5Q9H7D0 1870 aa14.95□□□□□ -0.02
USE1-207ENST00000596136 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 ATP9AO75110 1047 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 HOXC8P31273 242 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 RBL2Q08999 1139 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 MCTP2Q6DN12 878 aa14.94□□□□□ -0.02
USE1-207ENST00000596136 GDF6Q6KF10 455 aaPredicted RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 PSRC1Q6PGN9 363 aaPredicted RBP14.94□□□□□ -0.02
USE1-207ENST00000596136 CCDC12Q8WUD4 166 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms