RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 PCNX4Q63HM2 1172 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 USP17L6PQ6QN14 398 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 MICU3Q86XE3 530 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 CMTR1Q8N1G2 835 aaKnown RBP29.24■■■□□ 2.27
ZNF558-203ENST00000595786 CCDC155Q8N6L0 562 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 MLXIPQ9HAP2 919 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 COL6A3P12111 3177 aa29.24■■■□□ 2.27
ZNF558-203ENST00000595786 SPATA31C2B4DYI2 1134 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 NEDD9Q14511 834 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 PTGISQ16647 500 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 HSDL1Q3SXM5 330 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 CAGE1Q8TC20 777 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 SCLYQ96I15 445 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 CDX2Q99626 313 aaPredicted RBP29.23■■■□□ 2.27
ZNF558-203ENST00000595786 GTF2IRD1Q9UHL9 959 aa29.23■■■□□ 2.27
ZNF558-203ENST00000595786 ZBTB43O43298 467 aa29.22■■■□□ 2.27
ZNF558-203ENST00000595786 FIBPO43427 364 aa29.22■■■□□ 2.27
ZNF558-203ENST00000595786 C7orf31Q8N865 590 aa29.22■■■□□ 2.27
ZNF558-203ENST00000595786 VWCEQ96DN2 955 aa29.22■■■□□ 2.27
ZNF558-203ENST00000595786 IQCF3P0C7M6 154 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 CHMP4BP1P59074 171 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 MFSD10Q14728 455 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 GDF6Q6KF10 455 aaPredicted RBP29.21■■■□□ 2.27
ZNF558-203ENST00000595786 RAB11FIP4Q86YS3 637 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 CCDC82Q8N4S0 544 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 SLC17A8Q8NDX2 589 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 SENP7Q9BQF6 1050 aa29.21■■■□□ 2.27
ZNF558-203ENST00000595786 NEFLP07196 543 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 HSPA4P34932 840 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 RBL2Q08999 1139 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 RTN1Q16799 776 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 KIAA0753Q2KHM9 967 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 OTOP2Q7RTS6 562 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 NLRX1Q86UT6 975 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 PPP1R13LQ8WUF5 828 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 GPKOWQ92917 476 aaPredicted RBP eCLIP29.2■■■□□ 2.26
ZNF558-203ENST00000595786 TIFAQ96CG3 184 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 ZFP91Q96JP5 570 aaPredicted RBP29.2■■■□□ 2.26
ZNF558-203ENST00000595786 CXXC1Q9P0U4 656 aaPredicted RBP29.2■■■□□ 2.26
ZNF558-203ENST00000595786 HDAC6Q9UBN7 1215 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 BRPF3Q9ULD4 1205 aa29.2■■■□□ 2.26
ZNF558-203ENST00000595786 EPB41L2O43491 1005 aaKnown RBP29.19■■■□□ 2.26
ZNF558-203ENST00000595786 REC8O95072 547 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 PARNO95453 639 aaKnown RBP29.19■■■□□ 2.26
ZNF558-203ENST00000595786 RAB30Q15771 203 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 METTL7BQ6UX53 244 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 AFAP1L1Q8TED9 768 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 CTAGE1Q96RT6 745 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 PBX4Q9BYU1 374 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 RTEL1Q9NZ71 1219 aa29.19■■■□□ 2.26
ZNF558-203ENST00000595786 ACTN1P12814 892 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 GIMAP8Q8ND71 665 aaPredicted RBP29.18■■■□□ 2.26
ZNF558-203ENST00000595786 CDHR1Q96JP9 859 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 TCEANC2Q96MN5 208 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 C16orf70Q9BSU1 422 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 ALG1Q9BT22 464 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 USP26Q9BXU7 913 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 ZNF576Q9H609 170 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 MSRAQ9UJ68 235 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 SLC4A7Q9Y6M7 1214 aa29.18■■■□□ 2.26
ZNF558-203ENST00000595786 hCG_1642624A0A1W2PR95 340 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 hCG_1984214I3L0E3 225 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 ZNF286BP0CG31 522 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 FUT2Q10981 343 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 SEMA3FQ13275 785 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 FBXL16Q8N461 479 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 ZNF713Q8N859 430 aaPredicted RBP29.17■■■□□ 2.26
ZNF558-203ENST00000595786 GPRASP2Q96D09 838 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 CNTNAP5Q8WYK1 1306 aa29.17■■■□□ 2.26
ZNF558-203ENST00000595786 TRIP12Q14669 1992 aaPredicted RBP29.16■■■□□ 2.26
ZNF558-203ENST00000595786 KLF18A0A0U1RQI7 1052 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 SPDYE3A6NKU9 549 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 GRXCR1A8MXD5 290 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 NOP56O00567 594 aaKnown RBP29.16■■■□□ 2.26
ZNF558-203ENST00000595786 FGD1P98174 961 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 PTK7Q13308 1070 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 PPP1R18Q6NYC8 613 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 HEATR3Q7Z4Q2 680 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 DEFB128Q7Z7B8 93 aa29.16■■■□□ 2.26
ZNF558-203ENST00000595786 CCDC196A0A1B0GTZ2 297 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 GOLGA8AA7E2F4 631 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 GOLGA8BA8MQT2 603 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 H3BRB1 525 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 MAFGO15525 162 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 SELPP16109 830 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 CYFIP1Q7L576 1253 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 GLT8D2Q9H1C3 349 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 TUT1Q9H6E5 874 aaKnown RBP29.15■■■□□ 2.26
ZNF558-203ENST00000595786 EHMT1Q9H9B1 1298 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 SNX14Q9Y5W7 946 aa29.15■■■□□ 2.26
ZNF558-203ENST00000595786 BLOC1S2Q6QNY1 142 aa29.14■■■□□ 2.26
ZNF558-203ENST00000595786 JAKMIP1Q96N16 626 aaKnown RBP29.14■■■□□ 2.26
ZNF558-203ENST00000595786 FAM217BQ9NTX9 383 aaPredicted RBP29.14■■■□□ 2.26
ZNF558-203ENST00000595786 PCDHA6Q9UN73 950 aa29.14■■■□□ 2.26
ZNF558-203ENST00000595786 PCDHA8Q9Y5H6 950 aa29.14■■■□□ 2.26
ZNF558-203ENST00000595786 V9GY48 417 aaPredicted RBP29.14■■■□□ 2.26
ZNF558-203ENST00000595786 SCN5AQ14524 2016 aa29.13■■■□□ 2.25
ZNF558-203ENST00000595786 TANC1Q9C0D5 1861 aa29.13■■■□□ 2.25
ZNF558-203ENST00000595786 SORBS3O60504 671 aa29.13■■■□□ 2.25
ZNF558-203ENST00000595786 LGALS2P05162 132 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms