RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PCSK9Q8NBP7 692 aaKnown RBP16.37■□□□□ 0.21
LIG1-208ENST00000595758 OXER1Q8TDS5 423 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 CRYGNQ8WXF5 182 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 SNX21Q969T3 373 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 MXRA8Q9BRK3 442 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 JADE2Q9NQC1 790 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
LIG1-208ENST00000595758 KIAA1217Q5T5P2 1943 aa16.37■□□□□ 0.21
LIG1-208ENST00000595758 FRMPD3Q5JV73 1810 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 ZEB2O60315 1214 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 MMP1P03956 469 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 COL6A1P12109 1028 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 UBA1P22314 1058 aaKnown RBP16.36■□□□□ 0.21
LIG1-208ENST00000595758 KRT2P35908 639 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 SP2Q02086 613 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 MTMR1Q13613 665 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 CUL4AQ13619 759 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 LAMC2Q13753 1193 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIG1-208ENST00000595758 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
LIG1-208ENST00000595758 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
LIG1-208ENST00000595758 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
LIG1-208ENST00000595758 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
LIG1-208ENST00000595758 PHF24Q9UPV7 400 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
LIG1-208ENST00000595758 MOXD2PA6NHM9 499 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 MEIS1O00470 390 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 MAFGO15525 162 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 GGPS1O95749 300 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 CPT1AP50416 773 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 USP11P51784 963 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 ACLYP53396 1101 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 NEDD9Q14511 834 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIG1-208ENST00000595758 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
LIG1-208ENST00000595758 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 TBCKQ8TEA7 893 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
LIG1-208ENST00000595758 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 SENP7Q9BQF6 1050 aa16.35■□□□□ 0.21
LIG1-208ENST00000595758 A6NJR5 290 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 BTBD18B2RXH4 712 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 FAM86B1E9PN63 330 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
LIG1-208ENST00000595758 SORBS3O60504 671 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 ASGR1P07306 291 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 FAM86B2P0C5J1 330 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 GJB2P29033 226 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 CIITAP33076 1130 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 NR5A1Q13285 461 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
LIG1-208ENST00000595758 GIMAP8Q8ND71 665 aaPredicted RBP16.34■□□□□ 0.21
LIG1-208ENST00000595758 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 KCNH7Q9NS40 1196 aa16.34■□□□□ 0.21
LIG1-208ENST00000595758 BRCA2P51587 3418 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 A0A1W2PQ45 241 aaPredicted RBP16.33■□□□□ 0.2
LIG1-208ENST00000595758 A0A1W2PQY0 241 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 ATP9AO75110 1047 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 ARP10275 920 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
LIG1-208ENST00000595758 INF2Q27J81 1249 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 CYFIP1Q7L576 1253 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 HSCBQ8IWL3 235 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 PPTC7Q8NI37 304 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 BCAS3Q9H6U6 928 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 PKD2L1Q9P0L9 805 aa16.33■□□□□ 0.2
LIG1-208ENST00000595758 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 EDIL3O43854 480 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 KPNA6O60684 536 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 CABYRO75952 493 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 MYL3P08590 195 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 KCNA2P16389 499 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
LIG1-208ENST00000595758 PRR16Q569H4 304 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 METTL7BQ6UX53 244 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 TNFRSF25Q93038 417 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 AGO4Q9HCK5 861 aaKnown RBP16.32■□□□□ 0.2
LIG1-208ENST00000595758 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
LIG1-208ENST00000595758 ELP1O95163 1332 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 MMP3P08254 477 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
LIG1-208ENST00000595758 DGKDQ16760 1214 aa16.31■□□□□ 0.2
LIG1-208ENST00000595758 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms