RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 SFMBT2Q5VUG0 894 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 EEF2KMTQ96G04 330 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 ZIM3Q96PE6 472 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 RIOX1Q9H6W3 641 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 YY1AP1Q9H869 796 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 SALL4Q9UJQ4 1053 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 COL4A3BPQ9Y5P4 624 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 ATP8B3O60423 1300 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 CNTNAP4Q9C0A0 1308 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 ERLIN2O94905 339 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 SLC1A4P43007 532 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 FKBP3Q00688 224 aaKnown RBP14.62□□□□□ -0.07
VRK3-209ENST00000594948 RASSF7Q02833 373 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 CFAP58Q5T655 872 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 PPP1R18Q6NYC8 613 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 MMS22LQ6ZRQ5 1243 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.62□□□□□ -0.07
VRK3-209ENST00000594948 MYOCDQ8IZQ8 938 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 HPS3Q969F9 1004 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 ARL8AQ96BM9 186 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 SPATA31A1Q5TZJ5 1347 aa14.62□□□□□ -0.07
VRK3-209ENST00000594948 NCK2O43639 380 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 TXKP42681 527 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-209ENST00000594948 GFPT1Q06210 699 aaPredicted RBP14.61□□□□□ -0.07
VRK3-209ENST00000594948 C10orf76Q5T2E6 689 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 MEI1Q5TIA1 1274 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 C10orf71Q711Q0 1435 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 GGA2Q9UJY4 613 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 LEMD3Q9Y2U8 911 aa14.61□□□□□ -0.07
VRK3-209ENST00000594948 PLIN4Q96Q06 1357 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 GOLGA8HP0CJ92 632 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 MYBP10242 640 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 CXCR5P32302 372 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 HSPA2P54652 639 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 SLC18A3Q16572 532 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 HYIQ5T013 277 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 C15orf52Q6ZUT6 534 aaKnown RBP14.6□□□□□ -0.07
VRK3-209ENST00000594948 ZC3H3Q8IXZ2 948 aaKnown RBP14.6□□□□□ -0.07
VRK3-209ENST00000594948 MICALL1Q8N3F8 863 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
VRK3-209ENST00000594948 INPP4AQ96PE3 977 aaPredicted RBP14.6□□□□□ -0.07
VRK3-209ENST00000594948 EYA3Q99504 573 aa14.6□□□□□ -0.07
VRK3-209ENST00000594948 NOL4O94818 638 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 GUCY2CP25092 1073 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 CDK8P49336 464 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 ADCY7P51828 1080 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 TNNC1P63316 161 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 TDRD12Q587J7 1177 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 FAM83BQ5T0W9 1011 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 SWT1Q5T5J6 900 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 TBC1D9BQ66K14 1250 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 PPP4R3AQ6IN85 833 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 LRIG3Q6UXM1 1119 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 MICALCLQ6ZW33 695 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 YTHDF3Q7Z739 585 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 TGFBRAP1Q8WUH2 860 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 DDX12PQ92771 950 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 ACSBG1Q96GR2 724 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 EHD2Q9NZN4 543 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 AIPL1Q9NZN9 384 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 ZNF335Q9H4Z2 1342 aaPredicted RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 KDM3AQ9Y4C1 1321 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 HMGB1P1B2RPK0 211 aaPredicted RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 TLR2O60603 784 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 GLI1P08151 1106 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 HSPA9P38646 679 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 USP8P40818 1118 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 GTF2A1P52655 376 aaPredicted RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 COASYQ13057 564 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 CCDC40Q4G0X9 1142 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 SLC44A5Q8NCS7 719 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 SNX29Q8TEQ0 813 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 DNAJC19Q96DA6 116 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 PIGSQ96S52 555 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 NAP1L4Q99733 375 aaKnown RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
VRK3-209ENST00000594948 TMEM59LQ9UK28 342 aa14.59□□□□□ -0.07
VRK3-209ENST00000594948 BHMG1C9JSJ3 638 aaPredicted RBP14.58□□□□□ -0.08
VRK3-209ENST00000594948 PALMO75781 387 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 PLCG2P16885 1265 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 ANXA13P27216 316 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 INPP5BP32019 993 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 CARSP49589 748 aaKnown RBP14.58□□□□□ -0.08
VRK3-209ENST00000594948 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 TXNRD3Q86VQ6 643 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 TRIM59Q8IWR1 403 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 PIK3R5Q8WYR1 880 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 CEP89Q96ST8 783 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 RTFDC1Q9BY42 306 aaPredicted RBP14.58□□□□□ -0.08
VRK3-209ENST00000594948 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms