RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TMEM232C9JQI7 657 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 LAD1O00515 517 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 TBC1D12O60347 775 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 BMP3P12645 472 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 TMEM139Q8IV31 216 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 ENOX1Q8TC92 643 aaKnown RBP17.09■□□□□ 0.33
PNKP-204ENST00000594661 CUL5Q93034 780 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 CABS1Q96KC9 395 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 VIPAS39Q9H9C1 493 aa17.09■□□□□ 0.33
PNKP-204ENST00000594661 TUBBP07437 444 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 OR52Z1P0C646 297 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 PRPHP41219 470 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.33
PNKP-204ENST00000594661 DPYDQ12882 1025 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 STAMQ92783 540 aa17.08■□□□□ 0.33
PNKP-204ENST00000594661 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.33
PNKP-204ENST00000594661 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.33
PNKP-204ENST00000594661 GCFC2P16383 781 aaKnown RBP17.08■□□□□ 0.32
PNKP-204ENST00000594661 RPS12P25398 132 aaKnown RBP17.08■□□□□ 0.32
PNKP-204ENST00000594661 TNNI2P48788 182 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 KARSQ15046 597 aaKnown RBP17.08■□□□□ 0.32
PNKP-204ENST00000594661 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 ARHGEF10LQ9HCE6 1279 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 PCDHA1Q9Y5I3 950 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
PNKP-204ENST00000594661 TMCO5BA8MYB1 307 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 FZD9O00144 591 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 EBAG9O00559 213 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
PNKP-204ENST00000594661 BIRC2Q13490 618 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 RASA3Q14644 834 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
PNKP-204ENST00000594661 SYDE2Q5VT97 1194 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 CEP112Q8N8E3 955 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 GSDMAQ96QA5 445 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 MTRQ99707 1265 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
PNKP-204ENST00000594661 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
PNKP-204ENST00000594661 RNF40O75150 1001 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 TDP2O95551 362 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
PNKP-204ENST00000594661 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
PNKP-204ENST00000594661 INHBEP58166 350 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 MED15Q96RN5 788 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 TMX2Q9Y320 296 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 SLC37A4O43826 429 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 ZNF18P17022 549 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
PNKP-204ENST00000594661 INPP5BP32019 993 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 CAP2P40123 477 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 MAP3K10Q02779 954 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 VSTM4Q8IW00 320 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 SUGCTQ9HAC7 445 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
PNKP-204ENST00000594661 ANKRD33BA6NCL7 494 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 CHUKO15111 745 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 FNTAP49354 379 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 ORC2Q13416 577 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 TEPSINQ96N21 525 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 BLZF1Q9H2G9 400 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 PHACTR2O75167 634 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 SYF2O95926 243 aaKnown RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 CRYMQ14894 314 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 PTPN21Q16825 1174 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 SMYD4Q8IYR2 804 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
PNKP-204ENST00000594661 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
PNKP-204ENST00000594661 MYH7BA7E2Y1 1941 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 H0YHG0 523 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms