RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 GRIN2DO15399 1336 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 FRMPD4Q14CM0 1322 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 SMCO2A6NFE2 343 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 B4GALT4O60513 344 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 FOSP01100 380 aaPredicted RBP19.9■□□□□ 0.78
IRF3-208ENST00000594387 ITGB8P26012 769 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 CDC27P30260 824 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 ADD1P35611 737 aaKnown RBP19.9■□□□□ 0.78
IRF3-208ENST00000594387 MYSM1Q5VVJ2 828 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 WWC2Q6AWC2 1192 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 RIC8AQ9NPQ8 531 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 PCDHA6Q9UN73 950 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 PCDHA8Q9Y5H6 950 aa19.9■□□□□ 0.78
IRF3-208ENST00000594387 RGS20O76081 388 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 ICAM3P32942 547 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 MRPS9P82933 396 aaKnown RBP19.89■□□□□ 0.77
IRF3-208ENST00000594387 UBE2SQ16763 222 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 GPR153Q6NV75 609 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 C7orf31Q8N865 590 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 RETREG2Q8NC44 543 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 RNPC3Q96LT9 517 aaKnown RBP19.89■□□□□ 0.77
IRF3-208ENST00000594387 INPP4AQ96PE3 977 aaPredicted RBP19.89■□□□□ 0.77
IRF3-208ENST00000594387 AGXT2Q9BYV1 514 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 BARHL2Q9NY43 387 aa19.89■□□□□ 0.77
IRF3-208ENST00000594387 SPATA31C2B4DYI2 1134 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 SORBS3O60504 671 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 SCG2P13521 617 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 UBA1P22314 1058 aaKnown RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 CYP2C18P33260 490 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 PFKFB3Q16875 520 aaPredicted RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 CPLX2Q6PUV4 134 aaKnown RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 RPUSD2Q8IZ73 545 aaKnown RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 CCDC155Q8N6L0 562 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 LRCH3Q96II8 777 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 ALG1Q9BT22 464 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 MTIF3Q9H2K0 278 aaKnown RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 FAM217BQ9NTX9 383 aaPredicted RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 PDRG1Q9NUG6 133 aa19.88■□□□□ 0.77
IRF3-208ENST00000594387 TRMT13Q9NUP7 481 aaKnown RBP19.88■□□□□ 0.77
IRF3-208ENST00000594387 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
IRF3-208ENST00000594387 CPLX1O14810 134 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 MAFGO15525 162 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 PRPF3O43395 683 aaKnown RBP19.87■□□□□ 0.77
IRF3-208ENST00000594387 CSF2RAP15509 400 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 PSEN2P49810 448 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
IRF3-208ENST00000594387 FUT2Q10981 343 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 BFSP2Q13515 415 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 MCTP2Q6DN12 878 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 PSRC1Q6PGN9 363 aaPredicted RBP19.87■□□□□ 0.77
IRF3-208ENST00000594387 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 GPRASP2Q96D09 838 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 C6orf50Q9HD87 102 aa19.87■□□□□ 0.77
IRF3-208ENST00000594387 STXBP3O00186 592 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 GNA11P29992 359 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 PDIA3P30101 505 aaKnown RBP19.86■□□□□ 0.77
IRF3-208ENST00000594387 SP2Q02086 613 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 AP3B2Q13367 1082 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 MFSD10Q14728 455 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 PTGISQ16647 500 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 HSDL1Q3SXM5 330 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 C9orf50Q5SZB4 431 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 METTL7BQ6UX53 244 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 CYFIP1Q7L576 1253 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 ZNF274Q96GC6 653 aaPredicted RBP19.86■□□□□ 0.77
IRF3-208ENST00000594387 SENP7Q9BQF6 1050 aa19.86■□□□□ 0.77
IRF3-208ENST00000594387 NOC4LQ9BVI4 516 aaKnown RBP19.86■□□□□ 0.77
IRF3-208ENST00000594387 UPF3BQ9BZI7 483 aaKnown RBP19.86■□□□□ 0.77
IRF3-208ENST00000594387 NID2Q14112 1375 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 ZNF286BP0CG31 522 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 CYP2C9P11712 490 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 ZNF76P36508 570 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 CCL23P55773 120 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 EVCP57679 992 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 ANAPC15P60006 121 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 MTMR1Q13613 665 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 KIAA0753Q2KHM9 967 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 SESTD1Q86VW0 696 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 CCDC148Q8NFR7 591 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 SLC26A6Q9BXS9 759 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 RNF26Q9BY78 433 aaPredicted RBP19.85■□□□□ 0.77
IRF3-208ENST00000594387 IL23AQ9NPF7 189 aa19.85■□□□□ 0.77
IRF3-208ENST00000594387 FGBP02675 491 aa19.84■□□□□ 0.77
IRF3-208ENST00000594387 IFNAR1P17181 557 aa19.84■□□□□ 0.77
IRF3-208ENST00000594387 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
IRF3-208ENST00000594387 BICD2Q8TD16 824 aa19.84■□□□□ 0.77
IRF3-208ENST00000594387 KAT2BQ92831 832 aa19.84■□□□□ 0.77
IRF3-208ENST00000594387 ZNF215Q9UL58 517 aaPredicted RBP19.84■□□□□ 0.77
IRF3-208ENST00000594387 DNAH12Q6ZR08 3092 aa19.84■□□□□ 0.77
IRF3-208ENST00000594387 SCN5AQ14524 2016 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 H3BRB1 525 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 F2P00734 622 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 EPHB4P54760 987 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 SP4Q02446 784 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 TOB2Q14106 344 aaPredicted RBP19.83■□□□□ 0.77
IRF3-208ENST00000594387 ANKRD1Q15327 319 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 PPP1R13LQ8WUF5 828 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 PHKBQ93100 1093 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.83■□□□□ 0.772e-6■□□□□ 10.9
IRF3-208ENST00000594387 ANO3Q9BYT9 981 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms