RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 C5orf42Q9H799 3197 aa9.98□□□□□ -0.81
SMG9-202ENST00000594081 MYH7BA7E2Y1 1941 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 MYO7AQ13402 2215 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 RSPH10B2B2RC85 870 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 TBX10O75333 385 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 RSPH10BP0C881 870 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
SMG9-202ENST00000594081 CTNNB1P35222 781 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 THPOP40225 353 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 DLX2Q07687 328 aaPredicted RBP9.97□□□□□ -0.81
SMG9-202ENST00000594081 TCF15Q12870 199 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
SMG9-202ENST00000594081 HIC1Q14526 733 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 IER5LQ5T953 404 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
SMG9-202ENST00000594081 PPTC7Q8NI37 304 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 EDAQ92838 391 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
SMG9-202ENST00000594081 TMEM47Q9BQJ4 181 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 KIAA1671Q9BY89 1806 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 ZDBF2Q9HCK1 2354 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 MYH6P13533 1939 aa9.97□□□□□ -0.81
SMG9-202ENST00000594081 TMEM221A6NGB7 291 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 M0R296 226 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 STXBP3O00186 592 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 NCK2O43639 380 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 ORC4O43929 436 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 UPP2O95045 317 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 CSPG5O95196 566 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 MS4A1P11836 297 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 HYAL1Q12794 435 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 BMP8AQ7Z5Y6 402 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 SERINC5Q86VE9 423 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 NSUN6Q8TEA1 469 aaKnown RBP9.96□□□□□ -0.82
SMG9-202ENST00000594081 SEPT8Q92599 483 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 TOP1MTQ969P6 601 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 TAAR1Q96RJ0 339 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 PRRX2Q99811 253 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 FSD1Q9BTV5 496 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 IFIH1Q9BYX4 1025 aaKnown RBP9.96□□□□□ -0.82
SMG9-202ENST00000594081 TOMM22Q9NS69 142 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 COL20A1Q9P218 1284 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 TRIOO75962 3097 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 PLXNA3P51805 1871 aa9.96□□□□□ -0.82
SMG9-202ENST00000594081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 C5orf67F2Z3F1 127 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 GFRA3O60609 400 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 CTSHP09668 335 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 SNHG28P0DPA3 235 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 HOXD8P13378 290 aaPredicted RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 EIF2AK2P19525 551 aaKnown RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMG9-202ENST00000594081 STXBP2Q15833 593 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 SUGP1Q8IWZ8 645 aaKnown RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 SYTL5Q8TDW5 730 aaPredicted RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 RMDN3Q96TC7 470 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 FAM86C1Q9NVL1 165 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 DDX41Q9UJV9 622 aaKnown RBP9.95□□□□□ -0.82
SMG9-202ENST00000594081 ANAPC4Q9UJX5 808 aa9.95□□□□□ -0.82
SMG9-202ENST00000594081 LAMA4Q16363 1823 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 ABCB11O95342 1321 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 GRM6O15303 877 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 LINC01565O15544 149 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 SORBS3O60504 671 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 FGRP09769 529 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 GOLGA8HP0CJ92 632 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 GTF2F1P35269 517 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMG9-202ENST00000594081 LAMC2Q13753 1193 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 PKN1Q16512 942 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
SMG9-202ENST00000594081 VPS53Q5VIR6 699 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 FIBCD1Q8N539 461 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 IWS1Q96ST2 819 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 OSBPL7Q9BZF2 842 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 CHMP4BQ9H444 224 aaKnown RBP9.94□□□□□ -0.82
SMG9-202ENST00000594081 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 CACNA1HO95180 2353 aa9.94□□□□□ -0.82
SMG9-202ENST00000594081 TTC41PQ6P2S7 1318 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 CCDC171Q6TFL3 1326 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 C17orf102A2RUQ5 167 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 CAND2O75155 1236 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 MMP1P03956 469 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 HOXC8P31273 242 aa9.93□□□□□ -0.82
SMG9-202ENST00000594081 NDUFV1P49821 464 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms