RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 BTBD18B2RXH4 712 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 SPATA31C2B4DYI2 1134 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 H3BQV1 296 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 DNM1LO00429 736 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 MAFGO15525 162 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 PTGS1P23219 599 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 NR5A1Q13285 461 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 BRDTQ58F21 947 aaPredicted RBP23.64■■□□□ 1.37
DNMT1-227ENST00000592342 GNASQ5JWF2 1037 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 IFFO2Q5TF58 517 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 DHX37Q8IY37 1157 aaKnown RBP23.64■■□□□ 1.37
DNMT1-227ENST00000592342 INTS4Q96HW7 963 aaKnown RBP23.64■■□□□ 1.37
DNMT1-227ENST00000592342 UPF3AQ9H1J1 476 aaKnown RBP23.64■■□□□ 1.37
DNMT1-227ENST00000592342 FOXD4L1Q9NU39 408 aa23.64■■□□□ 1.37
DNMT1-227ENST00000592342 KIAA0100Q14667 2235 aaKnown RBP23.64■■□□□ 1.37
DNMT1-227ENST00000592342 ZEB2O60315 1214 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 USP11P51784 963 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 NEDD9Q14511 834 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 INF2Q27J81 1249 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 PCSK9Q8NBP7 692 aaKnown RBP23.63■■□□□ 1.37
DNMT1-227ENST00000592342 CRYGNQ8WXF5 182 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 MLXIPQ9HAP2 919 aa23.63■■□□□ 1.37
DNMT1-227ENST00000592342 CENPFP49454 3210 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 SORBS3O60504 671 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 GGPS1O95749 300 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 UBA1P22314 1058 aaKnown RBP23.62■■□□□ 1.37
DNMT1-227ENST00000592342 CPT1AP50416 773 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 BEX3Q00994 111 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 FSCN1Q16658 493 aaKnown RBP23.62■■□□□ 1.37
DNMT1-227ENST00000592342 LARP1BQ659C4 914 aaKnown RBP23.62■■□□□ 1.37
DNMT1-227ENST00000592342 NECAB2Q7Z6G3 386 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 PLA2G4DQ86XP0 818 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 CYP2W1Q8TAV3 490 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 PAWRQ96IZ0 340 aaKnown RBP23.62■■□□□ 1.37
DNMT1-227ENST00000592342 PKD2L1Q9P0L9 805 aa23.62■■□□□ 1.37
DNMT1-227ENST00000592342 MYADML2A6NDP7 307 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 FAM86B1E9PN63 330 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 FAM86B2P0C5J1 330 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 CST5P28325 142 aaPredicted RBP23.61■■□□□ 1.37
DNMT1-227ENST00000592342 SETQ01105 290 aaPredicted RBP23.61■■□□□ 1.37
DNMT1-227ENST00000592342 LAMC2Q13753 1193 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 NIPA1Q7RTP0 329 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 NEK8Q86SG6 692 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 GIMAP8Q8ND71 665 aaPredicted RBP23.61■■□□□ 1.37
DNMT1-227ENST00000592342 KLHDC9Q8NEP7 349 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
DNMT1-227ENST00000592342 TSEN34Q9BSV6 310 aaKnown RBP23.61■■□□□ 1.37
DNMT1-227ENST00000592342 C11orf49Q9H6J7 331 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 KCNH7Q9NS40 1196 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 FRMPD3Q5JV73 1810 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 KIAA1217Q5T5P2 1943 aa23.61■■□□□ 1.37
DNMT1-227ENST00000592342 MEIS1O00470 390 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 CIITAP33076 1130 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 IRX5P78411 483 aaPredicted RBP23.6■■□□□ 1.37
DNMT1-227ENST00000592342 SP2Q02086 613 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 ARHGAP1Q07960 439 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 SEMA3FQ13275 785 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 KCNA10Q16322 511 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 LETM2Q2VYF4 491 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 PRR16Q569H4 304 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 CELF3Q5SZQ8 465 aaKnown RBP23.6■■□□□ 1.37
DNMT1-227ENST00000592342 SPATA33Q96N06 139 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 NAP1L4Q99733 375 aaKnown RBP23.6■■□□□ 1.37
DNMT1-227ENST00000592342 SENP7Q9BQF6 1050 aa23.6■■□□□ 1.37
DNMT1-227ENST00000592342 FOXP1Q9H334 677 aaPredicted RBP23.6■■□□□ 1.37
DNMT1-227ENST00000592342 MOXD2PA6NHM9 499 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 ARP10275 920 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 PDCP20941 246 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 NKX3-2P78367 333 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 MCTP1Q6DN14 999 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 CYFIP1Q7L576 1253 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 TNFRSF25Q93038 417 aa23.59■■□□□ 1.37
DNMT1-227ENST00000592342 SENP6Q9GZR1 1112 aaPredicted RBP23.59■■□□□ 1.37
DNMT1-227ENST00000592342 NOP56O00567 594 aaKnown RBP23.58■■□□□ 1.37
DNMT1-227ENST00000592342 CTAGE5O15320 804 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 ATP9AO75110 1047 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 ASGR1P07306 291 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 MYL3P08590 195 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 MNX1P50219 401 aaPredicted RBP23.58■■□□□ 1.37
DNMT1-227ENST00000592342 BECN1Q14457 450 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 EARS2Q5JPH6 523 aaKnown RBP23.58■■□□□ 1.37
DNMT1-227ENST00000592342 MYSM1Q5VVJ2 828 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 AFG1LQ8WV93 481 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 EMID1Q96A84 441 aaPredicted RBP23.58■■□□□ 1.37
DNMT1-227ENST00000592342 FERMT2Q96AC1 680 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 VTI1AQ96AJ9 217 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 SDF4Q9BRK5 362 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 PHF24Q9UPV7 400 aa23.58■■□□□ 1.37
DNMT1-227ENST00000592342 IGLV3-22A0A075B6J6 115 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 FAM205CA6NFA0 338 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 CCNT1O60563 726 aaKnown RBP23.57■■□□□ 1.36
DNMT1-227ENST00000592342 TDP2O95551 362 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 ACLYP53396 1101 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 SP4Q02446 784 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 MOXD1Q6UVY6 613 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 METTL7BQ6UX53 244 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 ZNF577Q9BSK1 485 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 AGO4Q9HCK5 861 aaKnown RBP23.57■■□□□ 1.36
DNMT1-227ENST00000592342 POLR3EQ9NVU0 708 aa23.57■■□□□ 1.36
DNMT1-227ENST00000592342 A6NJR5 290 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms