RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 MEA1Q16626 185 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 CYP4A11Q02928 519 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 GFPT1Q06210 699 aaPredicted RBP18.59■□□□□ 0.57
CTDP1-207ENST00000591598 SEPT2Q15019 361 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 MAN2A1Q16706 1144 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 APOBEC3HQ6NTF7 200 aaKnown RBP18.59■□□□□ 0.57
CTDP1-207ENST00000591598 POTEGQ6S5H5 508 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 POTEEQ6S8J3 1075 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 EHD2Q9NZN4 543 aa18.59■□□□□ 0.57
CTDP1-207ENST00000591598 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.57
CTDP1-207ENST00000591598 PSMD14O00487 310 aa18.58■□□□□ 0.57
CTDP1-207ENST00000591598 HOXA10P31260 410 aaPredicted RBP18.58■□□□□ 0.57
CTDP1-207ENST00000591598 CRKP46108 304 aa18.58■□□□□ 0.57
CTDP1-207ENST00000591598 CASP8Q14790 479 aa18.58■□□□□ 0.57
CTDP1-207ENST00000591598 SKIDA1Q1XH10 827 aa18.58■□□□□ 0.57
CTDP1-207ENST00000591598 POTEB2H3BUK9 544 aa18.58■□□□□ 0.56
CTDP1-207ENST00000591598 PDE2AO00408 941 aaPredicted RBP18.58■□□□□ 0.56
CTDP1-207ENST00000591598 GUF1Q8N442 669 aaKnown RBP18.58■□□□□ 0.56
CTDP1-207ENST00000591598 RETREG2Q8NC44 543 aa18.58■□□□□ 0.56
CTDP1-207ENST00000591598 ERGIC2Q96RQ1 377 aa18.58■□□□□ 0.56
CTDP1-207ENST00000591598 NCK2O43639 380 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 HOXA13P31271 388 aaPredicted RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 RASSF7Q02833 373 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 GPS2Q13227 327 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 CDC37Q16543 378 aaPredicted RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 CERKLQ49MI3 558 aaPredicted RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 SLFN13Q68D06 897 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 PCDHA13Q9Y5I0 950 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 MYH10P35580 1976 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 ATP8B1O43520 1251 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 USO1O60763 962 aaKnown RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 EPS15P42566 896 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 PABPC4Q13310 644 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 PTPROQ16827 1216 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 QTRT2Q9H974 415 aaKnown RBP18.57■□□□□ 0.56
CTDP1-207ENST00000591598 PVALEFA0A1B0GWK0 134 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 VAV2P52735 878 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 HSP90B2PQ58FF3 399 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 L1RE1Q9UN81 338 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
CTDP1-207ENST00000591598 PLA2G4BP0C869 781 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 MAGEA1P43355 309 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 ADAM21Q9UKJ8 722 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 FGFR1OPO95684 399 aaKnown RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 MMP10P09238 476 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 CYP2C19P33261 490 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 RNASE9P60153 205 aaKnown RBP18.56■□□□□ 0.56
CTDP1-207ENST00000591598 PDIA5Q14554 519 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 CCDC170Q8IYT3 715 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 COG1Q8WTW3 980 aa18.56■□□□□ 0.56
CTDP1-207ENST00000591598 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 ANO3Q9BYT9 981 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 SWAP70Q9UH65 585 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 PLAGL2Q9UPG8 496 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 IGKV6D-41A0A0C4DH26 115 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 PPP1R2P41236 205 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
CTDP1-207ENST00000591598 LSM14BQ9BX40 385 aaKnown RBP18.55■□□□□ 0.56
CTDP1-207ENST00000591598 hCG_1984214I3L0E3 225 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 PSMC6P62333 389 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 SLC7A5Q01650 507 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 ICA1Q05084 483 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
CTDP1-207ENST00000591598 DNAAF5Q86Y56 855 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 ZNF713Q8N859 430 aaPredicted RBP18.55■□□□□ 0.56
CTDP1-207ENST00000591598 RIN2Q8WYP3 895 aaPredicted RBP18.55■□□□□ 0.56
CTDP1-207ENST00000591598 DNAJC19Q96DA6 116 aa18.55■□□□□ 0.56
CTDP1-207ENST00000591598 CCDC66A2RUB6 948 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 VGLL3A8MV65 326 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 TACC1O75410 805 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 EIF3JO75822 258 aaKnown RBP18.54■□□□□ 0.56
CTDP1-207ENST00000591598 FKBP3Q00688 224 aaKnown RBP18.54■□□□□ 0.56
CTDP1-207ENST00000591598 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 COL4A3BPQ9Y5P4 624 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 MAP2K7O14733 419 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 MED24O75448 989 aa18.54■□□□□ 0.56
CTDP1-207ENST00000591598 LRRC63Q05C16 580 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms