RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 DTHD1Q6ZMT9 781 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
APOC1-205ENST00000589781 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 TRPV1Q8NER1 839 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 GTF3C2Q8WUA4 911 aaPredicted RBP11.51□□□□□ -0.57
APOC1-205ENST00000589781 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 HOXC10Q9NYD6 342 aa11.51□□□□□ -0.57
APOC1-205ENST00000589781 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
APOC1-205ENST00000589781 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 BIN1O00499 593 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 LAD1O00515 517 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 CFBP00751 764 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 HOXC6P09630 235 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 ALAS1P13196 640 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 CDC25AP30304 524 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 TRAF1Q13077 416 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 U2AF1L4Q8WU68 220 aaKnown RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
APOC1-205ENST00000589781 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
APOC1-205ENST00000589781 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
APOC1-205ENST00000589781 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 NFIBO00712 420 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 SGPL1O95470 568 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 HMGCRP04035 888 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 GCFC2P16383 781 aaKnown RBP11.49□□□□□ -0.57
APOC1-205ENST00000589781 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
APOC1-205ENST00000589781 SREBF1P36956 1147 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 TXLNAP40222 546 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 TXKP42681 527 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 UBXN2AP68543 259 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 POSTNQ15063 836 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 E2F4Q16254 413 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 MUM1L1Q5H9M0 696 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 SHCBP1Q8NEM2 672 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 FAM200AQ8TCP9 573 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 CRYGNQ8WXF5 182 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 CLEC4DQ8WXI8 215 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 GJA10Q969M2 543 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.572e-7■■■■□ 19.8
APOC1-205ENST00000589781 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
APOC1-205ENST00000589781 POTEMA6NI47 508 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 ZBED4O75132 1171 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 FOSP01100 380 aaPredicted RBP11.48□□□□□ -0.57
APOC1-205ENST00000589781 ADORA2AP29274 412 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 TECP42680 631 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 TMEM266Q2M3C6 531 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 LHX8Q68G74 356 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 SLC30A10Q6XR72 485 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 CABP7Q86V35 215 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 RIOX2Q8IUF8 465 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 MB21D1Q8N884 522 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
APOC1-205ENST00000589781 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 FGD4Q96M96 766 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 NAP1L4Q99733 375 aaKnown RBP11.48□□□□□ -0.57
APOC1-205ENST00000589781 APBA2Q99767 749 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
APOC1-205ENST00000589781 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
APOC1-205ENST00000589781 CASP1P29466 404 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 CYP2C19P33261 490 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 STAT3P40763 770 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 RGS2P41220 211 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 AFMP43652 599 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
APOC1-205ENST00000589781 NLRP12P59046 1061 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 CCNA1P78396 465 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
APOC1-205ENST00000589781 PLS1Q14651 629 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
APOC1-205ENST00000589781 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 WDR78Q5VTH9 848 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 PDXDC2PQ6P474 469 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 MOXD1Q6UVY6 613 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
APOC1-205ENST00000589781 CEP57L1Q8IYX8 460 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms