RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 GBP4Q96PP9 640 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 SPC25Q9HBM1 224 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 MRVI1Q9Y6F6 885 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 SMPD1P17405 629 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 SREBF1P36956 1147 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 MRPS9P82933 396 aaKnown RBP24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 ANKLE1Q8NAG6 615 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 ARRDC4Q8NCT1 418 aa24.18■■□□□ 1.46
R3HDM4-204ENST00000589428 KIAA1217Q5T5P2 1943 aa24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 MYCNP04198 464 aaPredicted RBP24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 TXNP10599 105 aaKnown RBP24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 DUSP28Q4G0W2 176 aa24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 PIK3AP1Q6ZUJ8 805 aa24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 ZFP91Q96JP5 570 aaPredicted RBP24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 SYNRGQ9UMZ2 1314 aa24.17■■□□□ 1.46
R3HDM4-204ENST00000589428 NKRFO15226 690 aaKnown RBP eCLIP24.16■■□□□ 1.462e-6■■■■□ 24.3
R3HDM4-204ENST00000589428 KCNV1Q6PIU1 500 aa24.16■■□□□ 1.46
R3HDM4-204ENST00000589428 TLK2Q86UE8 772 aa24.16■■□□□ 1.46
R3HDM4-204ENST00000589428 INPP4AQ96PE3 977 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-204ENST00000589428 FTOQ9C0B1 505 aaKnown RBP eCLIP24.16■■□□□ 1.461e-6■■□□□ 12.6
R3HDM4-204ENST00000589428 RTEL1Q9NZ71 1219 aa24.16■■□□□ 1.46
R3HDM4-204ENST00000589428 GNEQ9Y223 722 aaKnown RBP24.16■■□□□ 1.46
R3HDM4-204ENST00000589428 FARP2O94887 1054 aaPredicted RBP24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 PGK1P00558 417 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 NCLP19338 710 aaKnown RBP24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 RNF180Q86T96 592 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 NLRX1Q86UT6 975 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 AP5M1Q9H0R1 490 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 CCDC194A0A1B0GVG4 234 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 RGS20O76081 388 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 TOB1P50616 345 aaPredicted RBP24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 KRT85P78386 507 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 ARHGAP4P98171 946 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 KRT25Q7Z3Z0 450 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 USP28Q96RU2 1077 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 TFIP11Q9UBB9 837 aaKnown RBP24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 Q9Y3F1 56 aa24.15■■□□□ 1.46
R3HDM4-204ENST00000589428 KBTBD13C9JR72 458 aa24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 DNM1LO00429 736 aa24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 ADAMTS4O75173 837 aa24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 ARIH2O95376 493 aa24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 C6orf222P0C671 652 aaPredicted RBP24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 GJC2Q5T442 439 aaPredicted RBP24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 CCDC62Q6P9F0 684 aa24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 ZNF396Q96N95 335 aaPredicted RBP24.14■■□□□ 1.45
R3HDM4-204ENST00000589428 FIBPO43427 364 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 ZNF76P36508 570 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 GJA9P57773 515 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 LRRC41Q15345 812 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 RILPL1Q5EBL4 403 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 TMEM63BQ5T3F8 832 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 OR6J1Q8NGC5 347 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 GPRASP2Q96D09 838 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 CDHR1Q96JP9 859 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 UPF3AQ9H1J1 476 aaKnown RBP24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 GDPD2Q9HCC8 539 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 DYNC1LI2O43237 492 aaPredicted RBP24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 TGFB3P10600 412 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 NBR1Q14596 966 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 LY6KQ17RY6 165 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 ATL3Q6DD88 541 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 DDX41Q9UJV9 622 aaKnown RBP24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 UBIAD1Q9Y5Z9 338 aa24.13■■□□□ 1.45
R3HDM4-204ENST00000589428 WNT7AO00755 349 aa24.12■■□□□ 1.45
R3HDM4-204ENST00000589428 ICAM3P32942 547 aa24.12■■□□□ 1.45
R3HDM4-204ENST00000589428 CEBPZQ03701 1054 aaKnown RBP24.12■■□□□ 1.45
R3HDM4-204ENST00000589428 NONOQ15233 471 aaKnown RBP eCLIP24.12■■□□□ 1.451e-6■■■□□ 16.8
R3HDM4-204ENST00000589428 INF2Q27J81 1249 aa24.12■■□□□ 1.45
R3HDM4-204ENST00000589428 GH1P01241 217 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 PTGS1P23219 599 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 MCM4P33991 863 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 MTMR1Q13613 665 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 CEP55Q53EZ4 464 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 COPS5Q92905 334 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 MXRA8Q9BRK3 442 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 POLR3EQ9NVU0 708 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 CFAP45Q9UL16 551 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 NOL7Q9UMY1 257 aaKnown RBP24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 CLIC4Q9Y696 253 aa24.11■■□□□ 1.45
R3HDM4-204ENST00000589428 CYP3A4P08684 503 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 ITGB5P18084 799 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 CST5P28325 142 aaPredicted RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 TRAPPC10P48553 1259 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 FSCN1Q16658 493 aaKnown RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 BRDTQ58F21 947 aaPredicted RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 NECAB2Q7Z6G3 386 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 TBCKQ8TEA7 893 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 DIS3LQ8TF46 1054 aaKnown RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 CRYGNQ8WXF5 182 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 PAWRQ96IZ0 340 aaKnown RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 JADE2Q9NQC1 790 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 MYH7BA7E2Y1 1941 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 MYADML2A6NDP7 307 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 SPATA31C2B4DYI2 1134 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 ATP2B1P20020 1258 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 UBA1P22314 1058 aaKnown RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 CPT1AP50416 773 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 GNASQ5JWF2 1037 aa24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 PCSK9Q8NBP7 692 aaKnown RBP24.1■■□□□ 1.45
R3HDM4-204ENST00000589428 KLHDC9Q8NEP7 349 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms