RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 COPS5Q92905 334 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 HIPK3Q9H422 1215 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 PPP4R2Q9NY27 417 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 MYO9BQ13459 2157 aa12.2□□□□□ -0.46
CLPTM1-211ENST00000589347 WDR81Q562E7 1941 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 CNTNAP5Q8WYK1 1306 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 CCDC196A0A1B0GTZ2 297 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 PIK3CDO00329 1044 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 B4GALT4O60513 344 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 TGFB3P10600 412 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 PTGS1P23219 599 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 HSPA4P34932 840 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 LAMC2Q13753 1193 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 LY6KQ17RY6 165 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 TMEM63BQ5T3F8 832 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 XRRA1Q6P2D8 792 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 RAB11FIP4Q86YS3 637 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 TEX2Q8IWB9 1127 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 CCDC155Q8N6L0 562 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 JAKMIP1Q96N16 626 aaKnown RBP12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
CLPTM1-211ENST00000589347 KLF18A0A0U1RQI7 1052 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 RASIP1Q5U651 963 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 AFG1LQ8WV93 481 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 TCEANC2Q96MN5 208 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 GLT8D2Q9H1C3 349 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 PRDM12Q9H4Q4 367 aa12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
CLPTM1-211ENST00000589347 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NOP56O00567 594 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 FIBPO43427 364 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 EIF5BO60841 1220 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 GGPS1O95749 300 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 PFKMP08237 780 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 BMP1P13497 986 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NAPAP54920 295 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 EXOSC10Q01780 885 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NEDD9Q14511 834 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 IL31RAQ8NI17 732 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 KCNB2Q92953 911 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NOC4LQ9BVI4 516 aaKnown RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 PBX4Q9BYU1 374 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CXXC1Q9P0U4 656 aaPredicted RBP12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 NID2Q14112 1375 aa12.17□□□□□ -0.46
CLPTM1-211ENST00000589347 CSF2RAP15509 400 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 CYP2C18P33260 490 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 RFC2P35250 354 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 BFSP2Q13515 415 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 USP17L6PQ6QN14 398 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 Q6ZUG5 572 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 SESTD1Q86VW0 696 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 IL27Q8NEV9 243 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 TRPV6Q9H1D0 765 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 TRMT13Q9NUP7 481 aaKnown RBP12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 SNX14Q9Y5W7 946 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
CLPTM1-211ENST00000589347 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 MEIS2O14770 477 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 RGS20O76081 388 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 F2P00734 622 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 ZNF286BP0CG31 522 aa12.15□□□□□ -0.46
CLPTM1-211ENST00000589347 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms