RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RNF10Q8N5U6 811 aaKnown RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 NLGN2Q8NFZ4 835 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 SLC16A10Q8TF71 515 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 DDX12PQ92771 950 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 COA7Q96BR5 231 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 FAM20AQ96MK3 541 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 PNMA5Q96PV4 448 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 MXD3Q9BW11 206 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 AMNQ9BXJ7 453 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 IDI2Q9BXS1 227 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 TTYH3Q9C0H2 523 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 VIPAS39Q9H9C1 493 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 SLC39A2Q9NP94 309 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 BLOC1S4Q9NUP1 217 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 TMEM260Q9NX78 707 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 CALCOCO1Q9P1Z2 691 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 PUF60Q9UHX1 559 aaKnown RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 PLAGL2Q9UPG8 496 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 JRKLQ9Y4A0 524 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 DAAM1Q9Y4D1 1078 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 COL4A3BPQ9Y5P4 624 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 LTBP1Q14766 1721 aa7.94□□□□□ -1.14
SPIDR-228ENST00000588781 COL2A1P02458 1487 aaPredicted RBP7.94□□□□□ -1.14
SPIDR-228ENST00000588781 SPDYE3A6NKU9 549 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 ADAMTS3O15072 1205 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CETN3O15182 167 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CALUO43852 315 aaPredicted RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 AKR1B10O60218 316 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 ENTPD3O75355 529 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 LCA5LO95447 670 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 TDP2O95551 362 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 TCP1P17987 556 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 SHMT1P34896 483 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 PAFAH1B1P43034 410 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 PLA2G4AP47712 749 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 APLP1P51693 650 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 PMS1P54277 932 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 MARSP56192 900 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 AMPD2Q01433 879 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 COASYQ13057 564 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 IFI16Q16666 785 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CERKLQ49MI3 558 aaPredicted RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 SLC9C1Q4G0N8 1177 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 SLFN13Q68D06 897 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 STYK1Q6J9G0 422 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CDC42EP5Q6NZY7 148 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 STXBP4Q6ZWJ1 553 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 KIAA0895Q8NCT3 520 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 LRRN4CLQ8ND94 238 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 GMCL1P1Q8NEA9 526 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 GMCL1Q96IK5 515 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 MBOAT7Q96N66 472 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CHP1Q99653 195 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 ANO3Q9BYT9 981 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 IFIH1Q9BYX4 1025 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 MMRN2Q9H8L6 949 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 METTL14Q9HCE5 456 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 PSD3Q9NYI0 1048 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 TMOD2Q9NZR1 351 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CWC15Q9P013 229 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 CEP72Q9P209 647 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 SERPINA10Q9UK55 444 aa7.93□□□□□ -1.14
SPIDR-228ENST00000588781 BZW2Q9Y6E2 419 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 BAZ2BQ9UIF8 2168 aaKnown RBP7.93□□□□□ -1.14
SPIDR-228ENST00000588781 A0A0U1RQG5 324 aaPredicted RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 F8W031 263 aaPredicted RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 TRAF5O00463 557 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 MAP2K7O14733 419 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 FANCGO15287 622 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PJA2O43164 708 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 SLC37A4O43826 429 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 COBLO75128 1261 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 CLSTN1O94985 981 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 SERPING1P05155 500 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 PLA2G4BP0C869 781 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 FCER1AP12319 257 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 GAP43P17677 238 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 MUTP22033 750 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 RPL13P26373 211 aaKnown RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 OAS2P29728 719 aaKnown RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 USP14P54578 494 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 HERVK_113P62684 666 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 ICA1Q05084 483 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 EHHADHQ08426 723 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 QRICH1Q2TAL8 776 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 Q4G0T1 1027 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 MIIPQ5JXC2 388 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 RBM26Q5T8P6 1007 aaKnown RBP7.92□□□□□ -1.14
SPIDR-228ENST00000588781 CCDC181Q5TID7 509 aa7.92□□□□□ -1.14
SPIDR-228ENST00000588781 SFMBT2Q5VUG0 894 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms