RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 KAT2BQ92831 832 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 GPKOWQ92917 476 aaPredicted RBP eCLIP12.06□□□□□ -0.48
TPM4-209ENST00000588483 ZNF274Q96GC6 653 aaPredicted RBP12.06□□□□□ -0.48
TPM4-209ENST00000588483 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 CYP46A1Q9Y6A2 500 aa12.06□□□□□ -0.48
TPM4-209ENST00000588483 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
TPM4-209ENST00000588483 HAS3O00219 553 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 SOX1O00570 391 aaPredicted RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 PRPF3O43395 683 aaKnown RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 F2P00734 622 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 MYL3P08590 195 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 SUPT20HL2P0C7V6 817 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 IFNAR1P17181 557 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 NAPAP54920 295 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 PKN1Q16512 942 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 DHX37Q8IY37 1157 aaKnown RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 CDHR1Q96JP9 859 aa12.05□□□□□ -0.48
TPM4-209ENST00000588483 RNF26Q9BY78 433 aaPredicted RBP12.05□□□□□ -0.48
TPM4-209ENST00000588483 SPDYE3A6NKU9 549 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 MAFGO15525 162 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 GGPS1O95749 300 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 SCG2P13521 617 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 FPGSQ05932 587 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 NEDD9Q14511 834 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 UBE2SQ16763 222 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 HSDL1Q3SXM5 330 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 METTL7BQ6UX53 244 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 NOC4LQ9BVI4 516 aaKnown RBP12.04□□□□□ -0.48
TPM4-209ENST00000588483 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 UBIAD1Q9Y5Z9 338 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
TPM4-209ENST00000588483 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 ITGB5P18084 799 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 HOXC8P31273 242 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 ADCY7P51828 1080 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 EPHB4P54760 987 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
TPM4-209ENST00000588483 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 GIMAP8Q8ND71 665 aaPredicted RBP12.03□□□□□ -0.48
TPM4-209ENST00000588483 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
TPM4-209ENST00000588483 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 SPATA33Q96N06 139 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
TPM4-209ENST00000588483 HIPK3Q9H422 1215 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 TANC1Q9C0D5 1861 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 DOCK5Q9H7D0 1870 aa12.03□□□□□ -0.48
TPM4-209ENST00000588483 KCNA2P16389 499 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 SREBF1P36956 1147 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 RBL2Q08999 1139 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPM4-209ENST00000588483 SHHQ15465 462 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 JADE2Q9NQC1 790 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 TRMT13Q9NUP7 481 aaKnown RBP12.02□□□□□ -0.49
TPM4-209ENST00000588483 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 GTF2IRD1Q9UHL9 959 aa12.02□□□□□ -0.49
TPM4-209ENST00000588483 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
TPM4-209ENST00000588483 CSF2RAP15509 400 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 CYP2C18P33260 490 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 PSEN2P49810 448 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 MFSD10Q14728 455 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 PSRC1Q6PGN9 363 aaPredicted RBP12.01□□□□□ -0.49
TPM4-209ENST00000588483 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 PHKBQ93100 1093 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
TPM4-209ENST00000588483 GPR20Q99678 358 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 BCAS3Q9H6U6 928 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
TPM4-209ENST00000588483 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 COL6A3P12111 3177 aa12.01□□□□□ -0.49
TPM4-209ENST00000588483 LGALS2P05162 132 aa12□□□□□ -0.49
TPM4-209ENST00000588483 PFKMP08237 780 aa12□□□□□ -0.49
TPM4-209ENST00000588483 CYP3A4P08684 503 aa12□□□□□ -0.49
TPM4-209ENST00000588483 ZNF286BP0CG31 522 aa12□□□□□ -0.49
TPM4-209ENST00000588483 GNA11P29992 359 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms