RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 HIPK3Q9H422 1215 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 FAM217BQ9NTX9 383 aaPredicted RBP11.43□□□□□ -0.58
CNN1-207ENST00000588468 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 NAP1L2Q9ULW6 460 aaPredicted RBP11.43□□□□□ -0.58
CNN1-207ENST00000588468 CYP46A1Q9Y6A2 500 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 SCN5AQ14524 2016 aa11.43□□□□□ -0.58
CNN1-207ENST00000588468 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 STXBP3O00186 592 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 CDC27P30260 824 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 ADCY7P51828 1080 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 AP3B2Q13367 1082 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 NEDD9Q14511 834 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 FAM47CQ5HY64 1035 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 PSRC1Q6PGN9 363 aaPredicted RBP11.42□□□□□ -0.58
CNN1-207ENST00000588468 NLRX1Q86UT6 975 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
CNN1-207ENST00000588468 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
CNN1-207ENST00000588468 GPRASP2Q96D09 838 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 SENP7Q9BQF6 1050 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 TRPV6Q9H1D0 765 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
CNN1-207ENST00000588468 GBF1Q92538 1859 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 SPATA31C2B4DYI2 1134 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 FOSP01100 380 aaPredicted RBP11.41□□□□□ -0.58
CNN1-207ENST00000588468 SCG2P13521 617 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 ANAPC15P60006 121 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 SHHQ15465 462 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 UBE2SQ16763 222 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
CNN1-207ENST00000588468 C9orf50Q5SZB4 431 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 MCTP2Q6DN12 878 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 RNPC3Q96LT9 517 aaKnown RBP11.41□□□□□ -0.58
CNN1-207ENST00000588468 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 RNF26Q9BY78 433 aaPredicted RBP11.41□□□□□ -0.58
CNN1-207ENST00000588468 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
CNN1-207ENST00000588468 CHD9Q3L8U1 2897 aa11.41□□□□□ -0.58
CNN1-207ENST00000588468 HAS3O00219 553 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 NOP56O00567 594 aaKnown RBP11.4□□□□□ -0.58
CNN1-207ENST00000588468 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 CYP2C18P33260 490 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 ADD1P35611 737 aaKnown RBP11.4□□□□□ -0.58
CNN1-207ENST00000588468 PSEN2P49810 448 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 EPHB4P54760 987 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 AKAP17AQ02040 695 aaKnown RBP11.4□□□□□ -0.58
CNN1-207ENST00000588468 SEMA3FQ13275 785 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 CCDC155Q8N6L0 562 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 CCDC148Q8NFR7 591 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 KAT2BQ92831 832 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 WNT8AQ9H1J5 351 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 IL23AQ9NPF7 189 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 TRMT13Q9NUP7 481 aaKnown RBP11.4□□□□□ -0.58
CNN1-207ENST00000588468 PCDHA6Q9UN73 950 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 NOD1Q9Y239 953 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 PCDHA8Q9Y5H6 950 aa11.4□□□□□ -0.58
CNN1-207ENST00000588468 COL6A3P12111 3177 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 WDR81Q562E7 1941 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 MAFGO15525 162 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 PFKMP08237 780 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 CSF2RAP15509 400 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 IFNAR1P17181 557 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 PDIA3P30101 505 aaKnown RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 RFC2P35250 354 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 SREBF1P36956 1147 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 SMAD3P84022 425 aaKnown RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 SP2Q02086 613 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 RBL2Q08999 1139 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 BFSP2Q13515 415 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 MFSD10Q14728 455 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 HSDL1Q3SXM5 330 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 CAGE1Q8TC20 777 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 ANO3Q9BYT9 981 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 MTIF3Q9H2K0 278 aaKnown RBP11.39□□□□□ -0.59
CNN1-207ENST00000588468 GTF2IRD1Q9UHL9 959 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
CNN1-207ENST00000588468 UMODL1Q5DID0 1318 aa11.38□□□□□ -0.59
CNN1-207ENST00000588468 MYH9P35579 1960 aaKnown RBP11.38□□□□□ -0.59
CNN1-207ENST00000588468 TMEM265A0A087WTH1 108 aa11.38□□□□□ -0.59
CNN1-207ENST00000588468 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
CNN1-207ENST00000588468 LGALS2P05162 132 aa11.38□□□□□ -0.59
CNN1-207ENST00000588468 CYP2C9P11712 490 aa11.38□□□□□ -0.59
CNN1-207ENST00000588468 CLK2P49760 499 aaKnown RBP11.38□□□□□ -0.59
CNN1-207ENST00000588468 MTMR1Q13613 665 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms