RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PDE6AP16499 860 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 GRIK1P39086 918 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 IARSP41252 1262 aaKnown RBP7.2□□□□□ -1.26
TUBD1-208ENST00000588009 TEKQ02763 1124 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 KLF1Q13351 362 aaPredicted RBP7.2□□□□□ -1.26
TUBD1-208ENST00000588009 MLC1Q15049 377 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 TMPRSS7Q7RTY8 843 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 OSTM1Q86WC4 334 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 JPH3Q8WXH2 748 aaPredicted RBP7.2□□□□□ -1.26
TUBD1-208ENST00000588009 SCYL1Q96KG9 808 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
TUBD1-208ENST00000588009 IP6K2Q9UHH9 426 aa7.2□□□□□ -1.26
TUBD1-208ENST00000588009 WTIPA6NIX2 430 aaPredicted RBP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 H7BY64 318 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 ZNF561-AS1K7EIQ3 104 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 CCND1P24385 295 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 RPL10P27635 214 aaKnown RBP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 HLTFQ14527 1009 aaKnown RBP eCLIP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 DDB1Q16531 1140 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 RSPO4Q2I0M5 234 aaPredicted RBP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 PRR23CQ6ZRP0 262 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 CREG2Q8IUH2 290 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 PMM1Q92871 262 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
TUBD1-208ENST00000588009 BOCQ9BWV1 1114 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 OSBPL1AQ9BXW6 950 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 SLC13A1Q9BZW2 595 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 ATG3Q9NT62 314 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 ADGRE2Q9UHX3 823 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 ZNF281Q9Y2X9 895 aa7.19□□□□□ -1.26
TUBD1-208ENST00000588009 LOC102724159A0A0B4J2E5 919 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 SLC12A8A0AV02 714 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 GOLGA6CA6NDK9 693 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 GOLGA6BA6NDN3 693 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 H7C1D1 291 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 MT-CO1P00395 513 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 ESR1P03372 595 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 KRT18P05783 430 aaKnown RBP7.18□□□□□ -1.26
TUBD1-208ENST00000588009 GOLGA6DP0CG33 693 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 ZBTB48P10074 688 aaPredicted RBP7.18□□□□□ -1.26
TUBD1-208ENST00000588009 JAM2P57087 298 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 RHBDL3P58872 404 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 EGR3Q06889 387 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 NFIAQ12857 509 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 PWP2Q15269 919 aaKnown RBP7.18□□□□□ -1.26
TUBD1-208ENST00000588009 NKAPLQ5M9Q1 402 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 BROXQ5VW32 411 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 HLA-DQA1Q5Y7H0 255 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 CEP68Q76N32 757 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 WAPLQ7Z5K2 1190 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 NLRP10Q86W26 655 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 MAGEB6Q8N7X4 407 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 TMEM169Q96HH4 297 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 DBNDD2Q9BQY9 259 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 SMURF1Q9HCE7 757 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 LRRC4CQ9HCJ2 640 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 TCF7L1Q9HCS4 588 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 C14orf119Q9NWQ9 140 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 BTG4Q9NY30 223 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 GOLGA6AQ9NYA3 693 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
TUBD1-208ENST00000588009 SNX11Q9Y5W9 270 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 WASHC2AQ641Q2 1341 aa7.18□□□□□ -1.26
TUBD1-208ENST00000588009 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 FZD9O00144 591 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 KRT37O76014 449 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 SNUPNO95149 360 aaKnown RBP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 AMY2AP04746 511 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 KRT15P19012 456 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 AMY2BP19961 511 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 CEBPAP49715 358 aaPredicted RBP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 UBE4AQ14139 1066 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 PCBP2Q15366 365 aaKnown RBP eCLIP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 GPR19Q15760 415 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 CXorf57Q6NSI4 855 aaKnown RBP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 ARHGAP36Q6ZRI8 547 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 C1orf162Q8NEQ5 155 aaPredicted RBP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 FAXDC2Q96IV6 333 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 FCRL2Q96LA5 508 aaPredicted RBP7.17□□□□□ -1.26
TUBD1-208ENST00000588009 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 ARNT2Q9HBZ2 717 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 ATP13A1Q9HD20 1204 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 TPSG1Q9NRR2 321 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 SPO11Q9Y5K1 396 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 PITPNM2Q9BZ72 1349 aa7.17□□□□□ -1.26
TUBD1-208ENST00000588009 TMEM265A0A087WTH1 108 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 PPP1R11O60927 126 aaPredicted RBP7.16□□□□□ -1.26
TUBD1-208ENST00000588009 RBP3P10745 1247 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 GNAT1P11488 350 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 COL6A2P12110 1019 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 TERF2Q15554 542 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 IFI16Q16666 785 aaKnown RBP7.16□□□□□ -1.26
TUBD1-208ENST00000588009 GFOD2Q3B7J2 385 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 PGM2L1Q6PCE3 622 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 HHIPL2Q6UWX4 724 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 RASSF3Q86WH2 238 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms