RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 HSF2BPO75031 334 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 MOCS3O95396 460 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 MARSP56192 900 aaKnown RBP20.54■□□□□ 0.88
DDX39A-206ENST00000587730 DIXDC1Q155Q3 683 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 USP17L2Q6R6M4 530 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 PPM1EQ8WY54 764 aa20.54■□□□□ 0.88
DDX39A-206ENST00000587730 BIN2Q9UBW5 565 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-206ENST00000587730 AGPSO00116 658 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 KCNQ2O43526 872 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 CORO7P57737 925 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 C10orf76Q5T2E6 689 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 SFMBT2Q5VUG0 894 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 C8orf74Q6P047 294 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 SND1Q7KZF4 910 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 TRERF1Q96PN7 1200 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 EFCC1Q9HA90 598 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 SAP30BPQ9UHR5 308 aaKnown RBP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 CES2O00748 559 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 PLEKP08567 350 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 HYIQ5T013 277 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 EFCAB13Q8IY85 973 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 EIF1ADQ8N9N8 165 aaKnown RBP20.53■□□□□ 0.88
DDX39A-206ENST00000587730 DDX12PQ92771 950 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 LRRC1Q9BTT6 524 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 MLXIPQ9HAP2 919 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
DDX39A-206ENST00000587730 MYO3BQ8WXR4 1341 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 PDHBP11177 359 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 ZCWPW2Q504Y3 356 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 PTF1AQ7RTS3 328 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 CCDC65Q8IXS2 484 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 C10orf67Q8IYJ2 551 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 RSPH14Q9UHP6 348 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 JAG2Q9Y219 1238 aa20.52■□□□□ 0.88
DDX39A-206ENST00000587730 NHSQ6T4R5 1651 aa20.52■□□□□ 0.87
DDX39A-206ENST00000587730 SNHG28P0DPA3 235 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 MYBL2P10244 700 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 IL1R1P14778 569 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 ANXA13P27216 316 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 MRPL12P52815 198 aaKnown RBP20.51■□□□□ 0.87
DDX39A-206ENST00000587730 PAK2Q13177 524 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 EEF2KMTQ96G04 330 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 GAKO14976 1311 aa20.51■□□□□ 0.87
DDX39A-206ENST00000587730 PNMA6FA0A0J9YX94 578 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 BTNL10A8MVZ5 291 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 EPHB6O15197 1021 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 FAM26FQ5R3K3 315 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 C1orf131Q8NDD1 294 aaKnown RBP20.5■□□□□ 0.87
DDX39A-206ENST00000587730 CAPS2Q9BXY5 557 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 LCMT1Q9UIC8 334 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 ATP6V0A2Q9Y487 856 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 SHTN1A0MZ66 631 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 ZMYND10O75800 440 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 NAB2Q15742 525 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 IFI16Q16666 785 aaKnown RBP20.5■□□□□ 0.87
DDX39A-206ENST00000587730 TDRD12Q587J7 1177 aaKnown RBP20.5■□□□□ 0.87
DDX39A-206ENST00000587730 HGSNATQ68CP4 663 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 HAUS3Q68CZ6 603 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 NFRKBQ6P4R8 1299 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 DYMQ7RTS9 669 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 MREGQ8N565 214 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 CUL5Q93034 780 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 TLR10Q9BXR5 811 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 VAT1LQ9HCJ6 419 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 STK24Q9Y6E0 443 aa20.5■□□□□ 0.87
DDX39A-206ENST00000587730 USP17L5A8MUK1 530 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 GNPATO15228 680 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 SKOR1P84550 965 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 COASYQ13057 564 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 KLHDC7AQ5VTJ3 777 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 MCTP2Q6DN12 878 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 SPATS2Q86XZ4 545 aaKnown RBP20.49■□□□□ 0.87
DDX39A-206ENST00000587730 SMCR8Q8TEV9 937 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-206ENST00000587730 HPS3Q969F9 1004 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 SRP68Q9UHB9 627 aaKnown RBP20.49■□□□□ 0.87
DDX39A-206ENST00000587730 DMGDHQ9UI17 866 aaKnown RBP20.49■□□□□ 0.87
DDX39A-206ENST00000587730 BZW2Q9Y6E2 419 aaKnown RBP20.49■□□□□ 0.87
DDX39A-206ENST00000587730 BTAF1O14981 1849 aa20.49■□□□□ 0.87
DDX39A-206ENST00000587730 TRAF5O00463 557 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 SLC37A4O43826 429 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 EDRF1Q3B7T1 1238 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 FAM83BQ5T0W9 1011 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
DDX39A-206ENST00000587730 ZC3H3Q8IXZ2 948 aaKnown RBP20.48■□□□□ 0.87
DDX39A-206ENST00000587730 GDF3Q9NR23 364 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 PANK4Q9NVE7 773 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 TMEM260Q9NX78 707 aa20.48■□□□□ 0.87
DDX39A-206ENST00000587730 DDX25Q9UHL0 483 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms