RNA–Protein interactions for RNA: ENST00000587722.1

BLOC1S3-202, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 BASIC

Gene BLOC1S3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-202ENST00000587722 NEFLP07196 543 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 HMGB1P09429 215 aaKnown RBP28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 PSEN2P49810 448 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 PTGISQ16647 500 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 HSDL1Q3SXM5 330 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 PSTPIP2Q9H939 334 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 RBM28Q9NW13 759 aaKnown RBP28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 CXXC1Q9P0U4 656 aaPredicted RBP28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 BRPF3Q9ULD4 1205 aa28.77■■■□□ 2.2
BLOC1S3-202ENST00000587722 ZBTB43O43298 467 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 PPFIA4O75335 1185 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 PCNX4Q63HM2 1172 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 GDF6Q6KF10 455 aaPredicted RBP28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 OTOP2Q7RTS6 562 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 VWCEQ96DN2 955 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 CDX2Q99626 313 aaPredicted RBP28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 MLXIPQ9HAP2 919 aa28.76■■■□□ 2.19
BLOC1S3-202ENST00000587722 PFKMP08237 780 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 ICAM3P32942 547 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 BFSP2Q13515 415 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 MFSD10Q14728 455 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 RTN1Q16799 776 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 XRRA1Q6P2D8 792 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 HEATR3Q7Z4Q2 680 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 C7orf31Q8N865 590 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 RETREG2Q8NC44 543 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 KCNB2Q92953 911 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 RTEL1Q9NZ71 1219 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 GTF2IRD1Q9UHL9 959 aa28.75■■■□□ 2.19
BLOC1S3-202ENST00000587722 TANC1Q9C0D5 1861 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 CNTNAP5Q8WYK1 1306 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 CDH23Q9H251 3354 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 GRXCR1A8MXD5 290 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 SPATA31C2B4DYI2 1134 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 HAS3O00219 553 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 FIBPO43427 364 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 KIAA0753Q2KHM9 967 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 CTAGE1Q96RT6 745 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 ALG1Q9BT22 464 aa28.74■■■□□ 2.19
BLOC1S3-202ENST00000587722 KLF18A0A0U1RQI7 1052 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 HSPA4P34932 840 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 RFC2P35250 354 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 SEMA3FQ13275 785 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 CCDC155Q8N6L0 562 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 TIFAQ96CG3 184 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 PBX4Q9BYU1 374 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 HDAC6Q9UBN7 1215 aa28.73■■■□□ 2.19
BLOC1S3-202ENST00000587722 SCN5AQ14524 2016 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 IQCF3P0C7M6 154 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 NEDD9Q14511 834 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 DEFB128Q7Z7B8 93 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 SLC17A8Q8NDX2 589 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 CAGE1Q8TC20 777 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 BCAS3Q9H6U6 928 aa28.72■■■□□ 2.19
BLOC1S3-202ENST00000587722 GOLGA8AA7E2F4 631 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 GOLGA8BA8MQT2 603 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 PBX2P40425 430 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 RCAN1P53805 252 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 FGD1P98174 961 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 FUT2Q10981 343 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 UBE2SQ16763 222 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 METTL7BQ6UX53 244 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 JAKMIP1Q96N16 626 aaKnown RBP28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 C16orf70Q9BSU1 422 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 SNX14Q9Y5W7 946 aa28.71■■■□□ 2.19
BLOC1S3-202ENST00000587722 NOP56O00567 594 aaKnown RBP28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 REC8O95072 547 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 CPA1P15085 419 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 WWC2Q6AWC2 1192 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 CYFIP1Q7L576 1253 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 AFAP1L1Q8TED9 768 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 SLC4A7Q9Y6M7 1214 aa28.7■■■□□ 2.18
BLOC1S3-202ENST00000587722 SPDYE3A6NKU9 549 aa28.69■■■□□ 2.18
BLOC1S3-202ENST00000587722 NLRX1Q86UT6 975 aa28.69■■■□□ 2.18
BLOC1S3-202ENST00000587722 MYLIPQ8WY64 445 aa28.69■■■□□ 2.18
BLOC1S3-202ENST00000587722 DHX38Q92620 1227 aaKnown RBP28.69■■■□□ 2.18
BLOC1S3-202ENST00000587722 ZNF576Q9H609 170 aa28.69■■■□□ 2.18
BLOC1S3-202ENST00000587722 TRIP12Q14669 1992 aaPredicted RBP28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 ZBBXA8MT70 800 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 LGALS2P05162 132 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 RBL2Q08999 1139 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 RAB30Q15771 203 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 PPP1R18Q6NYC8 613 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 BLOC1S2Q6QNY1 142 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 SENP7Q9BQF6 1050 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 FAM217BQ9NTX9 383 aaPredicted RBP28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 NAP1L2Q9ULW6 460 aaPredicted RBP28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 V9GY48 417 aaPredicted RBP28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 DOCK5Q9H7D0 1870 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 CHD9Q3L8U1 2897 aa28.68■■■□□ 2.18
BLOC1S3-202ENST00000587722 ACTN1P12814 892 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 CDC27P30260 824 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 NAPAP54920 295 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 Q6ZUG5 572 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 GPRASP2Q96D09 838 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 GPR20Q99678 358 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 MSRAQ9UJ68 235 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 PCDHA6Q9UN73 950 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 PCDHA8Q9Y5H6 950 aa28.67■■■□□ 2.18
BLOC1S3-202ENST00000587722 H3BRB1 525 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms