RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 EFCAB14O75071 495 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 RGS20O76081 388 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 GJB5O95377 273 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 IGHDP01880 384 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 ZNF286BP0CG31 522 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 DEFB103AP81534 67 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 IKBKEQ14164 716 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 SPRED2Q7Z698 418 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 TMCO2Q7Z6W1 182 aaPredicted RBP16.35■□□□□ 0.21
DNMT1-213ENST00000587604 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 HLA-CQ95604 372 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 RAD9AQ99638 391 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
DNMT1-213ENST00000587604 ZBTB5O15062 677 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 TGFB3P10600 412 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 MYCLP12524 364 aaPredicted RBP16.34■□□□□ 0.21
DNMT1-213ENST00000587604 SEC23AQ15436 765 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
DNMT1-213ENST00000587604 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
DNMT1-213ENST00000587604 ZNF618Q5T7W0 954 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 MAD2L2Q9UI95 211 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
DNMT1-213ENST00000587604 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-213ENST00000587604 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-213ENST00000587604 ZNF200P98182 395 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-213ENST00000587604 TRAF1Q13077 416 aa16.33■□□□□ 0.2
DNMT1-213ENST00000587604 TCTN1Q2MV58 587 aa16.33■□□□□ 0.2
DNMT1-213ENST00000587604 HSDL1Q3SXM5 330 aa16.33■□□□□ 0.2
DNMT1-213ENST00000587604 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
DNMT1-213ENST00000587604 RAPGEFL1Q9UHV5 662 aa16.33■□□□□ 0.2
DNMT1-213ENST00000587604 GGPS1O95749 300 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
DNMT1-213ENST00000587604 ERVK-21P61565 698 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 SP2Q02086 613 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 MBTPS1Q14703 1052 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 PGM5Q15124 567 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 WNT8BQ93098 351 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
DNMT1-213ENST00000587604 C16orf70Q9BSU1 422 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
DNMT1-213ENST00000587604 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 SIP14410 1827 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
DNMT1-213ENST00000587604 LINC01553A4QN01 128 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 GCOM1H8Y6P7 765 aaPredicted RBP16.31■□□□□ 0.2
DNMT1-213ENST00000587604 LGR5O75473 907 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 HIC1Q14526 733 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 GDPD5Q8WTR4 605 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 MLXIPQ9HAP2 919 aa16.31■□□□□ 0.2
DNMT1-213ENST00000587604 RSPH10B2B2RC85 870 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 SORBS3O60504 671 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 RSPH10BP0C881 870 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
DNMT1-213ENST00000587604 CCND2P30279 289 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 THPOP40225 353 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 TRDNQ13061 729 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 IL25Q9H293 177 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 INSL6Q9Y581 213 aa16.3■□□□□ 0.2
DNMT1-213ENST00000587604 KAT6AQ92794 2004 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 H3BRB1 525 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-213ENST00000587604 GRM4Q14833 912 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 SLC35G1Q2M3R5 365 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 FAM117BQ6P1L5 589 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
DNMT1-213ENST00000587604 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 PIGSQ96S52 555 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 EPHX3Q9H6B9 360 aa16.29■□□□□ 0.2
DNMT1-213ENST00000587604 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
DNMT1-213ENST00000587604 PNMA6FA0A0J9YX94 578 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 C17orf102A2RUQ5 167 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 AMHP03971 560 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 HOXC8P31273 242 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 GNPTABQ3T906 1256 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
DNMT1-213ENST00000587604 GPKOWQ92917 476 aaPredicted RBP eCLIP16.28■□□□□ 0.2
DNMT1-213ENST00000587604 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
DNMT1-213ENST00000587604 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
DNMT1-213ENST00000587604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
DNMT1-213ENST00000587604 ERICH2A1L162 156 aa16.27■□□□□ 0.2
DNMT1-213ENST00000587604 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.2
DNMT1-213ENST00000587604 CYTH3O43739 400 aa16.27■□□□□ 0.2
DNMT1-213ENST00000587604 STAM2O75886 525 aa16.27■□□□□ 0.2
DNMT1-213ENST00000587604 LGALS2P05162 132 aa16.27■□□□□ 0.2
DNMT1-213ENST00000587604 ICAM3P32942 547 aa16.27■□□□□ 0.2
DNMT1-213ENST00000587604 HTRA4P83105 476 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms