RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ASIC1P78348 528 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 PLS1Q14651 629 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 LRCH2Q5VUJ6 765 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 DRC7Q8IY82 874 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 TRMT44Q8IYL2 757 aaKnown RBP22.23■■□□□ 1.15
TRIM47-204ENST00000587339 SPC24Q8NBT2 197 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 TAAR1Q96RJ0 339 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 LRRC27Q9C0I9 530 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 KIAA1024Q9UPX6 916 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 NFE2L3Q9Y4A8 694 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 COL11A1P12107 1806 aaPredicted RBP22.23■■□□□ 1.15
TRIM47-204ENST00000587339 PTPRFP10586 1907 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 POTEIP0CG38 1075 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 POTEJP0CG39 1038 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 PCNX4Q63HM2 1172 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 SLC5A5Q92911 643 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 RMDN3Q96TC7 470 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 ZNF577Q9BSK1 485 aa22.23■■□□□ 1.15
TRIM47-204ENST00000587339 RBBP6Q7Z6E9 1792 aaKnown RBP22.23■■□□□ 1.15
TRIM47-204ENST00000587339 FRMPD4Q14CM0 1322 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 POTEB3A0JP26 581 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 GOLGA6L6A8MZA4 724 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 MED24O75448 989 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 HOXA7P31268 230 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-204ENST00000587339 PPIL2Q13356 520 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 BAATQ14032 418 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-204ENST00000587339 TKFCQ3LXA3 575 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 POTEBQ6S5H4 581 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 CATSPER3Q86XQ3 398 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 IL31RAQ8NI17 732 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 MED15Q96RN5 788 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 SYNRGQ9UMZ2 1314 aa22.22■■□□□ 1.15
TRIM47-204ENST00000587339 PSMD10O75832 226 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 ARP10275 920 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 ATP1A3P13637 1013 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 ITGB5P18084 799 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 EIF2AK2P19525 551 aaKnown RBP22.21■■□□□ 1.15
TRIM47-204ENST00000587339 RPA1P27694 616 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 CDC25BP30305 580 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 MAP1SQ66K74 1059 aaPredicted RBP22.21■■□□□ 1.15
TRIM47-204ENST00000587339 OTOP1Q7RTM1 612 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 OPTNQ96CV9 577 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 KCNH4Q9UQ05 1017 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 GDAQ9Y2T3 454 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 MYMKA6NI61 221 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 GAS7O60861 476 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 BCRP11274 1271 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 PGM5Q15124 567 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 ACAD9Q9H845 621 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 EXOC1Q9NV70 894 aa22.21■■□□□ 1.15
TRIM47-204ENST00000587339 IPO5O00410 1097 aaKnown RBP22.2■■□□□ 1.14
TRIM47-204ENST00000587339 PDE4DQ08499 809 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 PPP2R5CQ13362 524 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 LDLRAD1Q5T700 205 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 ARHGEF16Q5VV41 709 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 LBX2Q6XYB7 198 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 NIPA1Q7RTP0 329 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 GIMAP8Q8ND71 665 aaPredicted RBP22.2■■□□□ 1.14
TRIM47-204ENST00000587339 ZNF408Q9H9D4 720 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 PXMP2Q9NR77 195 aa22.2■■□□□ 1.14
TRIM47-204ENST00000587339 POTEFA5A3E0 1075 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 E9PMD0 336 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 PRCPP42785 496 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 STX17P56962 302 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 IRX3P78415 501 aaPredicted RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 MRPS9P82933 396 aaKnown RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 FANCCQ00597 558 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 SPATA1Q5VX52 437 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 POTEGQ6S5H5 508 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 POTEEQ6S8J3 1075 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 MB21D1Q8N884 522 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 PDCD2LQ9BRP1 358 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 WDR11Q9BZH6 1224 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 KCNH7Q9NS40 1196 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 IFNKQ9P0W0 207 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 CTNND2Q9UQB3 1225 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 LOC285556D6RIA3 1793 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 TRAF5O00463 557 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 SERPINC1P01008 464 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 SPATA31C1P0DKV0 1188 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 PAK1Q13153 545 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 DYMQ7RTS9 669 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 DDX12PQ92771 950 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 PURBQ96QR8 312 aaKnown RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 RIT2Q99578 217 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 EIF2AK1Q9BQI3 630 aaKnown RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 GTPBP4Q9BZE4 634 aaKnown RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 XPO4Q9C0E2 1151 aaKnown RBP22.19■■□□□ 1.14
TRIM47-204ENST00000587339 MAPK8IP1Q9UQF2 711 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 UBIAD1Q9Y5Z9 338 aa22.19■■□□□ 1.14
TRIM47-204ENST00000587339 PVALEFA0A1B0GWK0 134 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 ESPNB1AK53 854 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 EML1O00423 815 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CHMP2AO43633 222 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 SSBP05455 408 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRIM47-204ENST00000587339 PLA2G4BP0C869 781 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 STIM1Q13586 685 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 CNNM4Q6P4Q7 775 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 UNC13DQ70J99 1090 aa22.18■■□□□ 1.14
TRIM47-204ENST00000587339 ZSCAN30Q86W11 494 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms