RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 MAFGO15525 162 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 RGS20O76081 388 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 ITGB8P26012 769 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 CDC27P30260 824 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
VAT1-203ENST00000587062 ADCY7P51828 1080 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 SHHQ15465 462 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 WWC2Q6AWC2 1192 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 CPLX2Q6PUV4 134 aaKnown RBP23.24■■□□□ 1.31
VAT1-203ENST00000587062 TRPV6Q9H1D0 765 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 BARHL2Q9NY43 387 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 PCDHA6Q9UN73 950 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 PCDHA8Q9Y5H6 950 aa23.24■■□□□ 1.31
VAT1-203ENST00000587062 SMCO2A6NFE2 343 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 SPATA31C2B4DYI2 1134 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 MRPS9P82933 396 aaKnown RBP23.23■■□□□ 1.31
VAT1-203ENST00000587062 FUT2Q10981 343 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 RPUSD2Q8IZ73 545 aaKnown RBP23.23■■□□□ 1.31
VAT1-203ENST00000587062 CCDC155Q8N6L0 562 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 C7orf31Q8N865 590 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 RETREG2Q8NC44 543 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 SENP7Q9BQF6 1050 aa23.23■■□□□ 1.31
VAT1-203ENST00000587062 MTIF3Q9H2K0 278 aaKnown RBP23.23■■□□□ 1.31
VAT1-203ENST00000587062 MYH7BA7E2Y1 1941 aa23.22■■□□□ 1.31
VAT1-203ENST00000587062 UBA1P22314 1058 aaKnown RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 PFKFB3Q16875 520 aaPredicted RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 PSRC1Q6PGN9 363 aaPredicted RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 GPRASP2Q96D09 838 aa23.22■■□□□ 1.31
VAT1-203ENST00000587062 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 FAM217BQ9NTX9 383 aaPredicted RBP23.22■■□□□ 1.31
VAT1-203ENST00000587062 CPLX1O14810 134 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 PRPF3O43395 683 aaKnown RBP23.21■■□□□ 1.31
VAT1-203ENST00000587062 SCG2P13521 617 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 GNA11P29992 359 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 EVCP57679 992 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 ANAPC15P60006 121 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 AP3B2Q13367 1082 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 BFSP2Q13515 415 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 UBE2SQ16763 222 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 METTL7BQ6UX53 244 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 TRIM22Q8IYM9 498 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 C6orf50Q9HD87 102 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 PDRG1Q9NUG6 133 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 TRMT13Q9NUP7 481 aaKnown RBP23.21■■□□□ 1.31
VAT1-203ENST00000587062 NID2Q14112 1375 aa23.21■■□□□ 1.31
VAT1-203ENST00000587062 STXBP3O00186 592 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 CSF2RAP15509 400 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 PDIA3P30101 505 aaKnown RBP23.2■■□□□ 1.3
VAT1-203ENST00000587062 CYP2C18P33260 490 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 PSEN2P49810 448 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 PTGISQ16647 500 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 SESTD1Q86VW0 696 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 ZNF274Q96GC6 653 aaPredicted RBP23.2■■□□□ 1.3
VAT1-203ENST00000587062 LRCH3Q96II8 777 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 ALG1Q9BT22 464 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 NOC4LQ9BVI4 516 aaKnown RBP23.2■■□□□ 1.3
VAT1-203ENST00000587062 RNF26Q9BY78 433 aaPredicted RBP23.2■■□□□ 1.3
VAT1-203ENST00000587062 SCN10AQ9Y5Y9 1956 aa23.2■■□□□ 1.3
VAT1-203ENST00000587062 SOX1O00570 391 aaPredicted RBP23.19■■□□□ 1.3
VAT1-203ENST00000587062 SP2Q02086 613 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 MTMR1Q13613 665 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 MFSD10Q14728 455 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 HSDL1Q3SXM5 330 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 C9orf50Q5SZB4 431 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 CYFIP1Q7L576 1253 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 CCDC148Q8NFR7 591 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 BICD2Q8TD16 824 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 IL23AQ9NPF7 189 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 PCDH10Q9P2E7 1040 aa23.19■■□□□ 1.3
VAT1-203ENST00000587062 DNAH12Q6ZR08 3092 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 F2P00734 622 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 FGBP02675 491 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 PFKMP08237 780 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 HOXD8P13378 290 aaPredicted RBP23.18■■□□□ 1.3
VAT1-203ENST00000587062 IFNAR1P17181 557 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 KIAA0753Q2KHM9 967 aa23.18■■□□□ 1.3
VAT1-203ENST00000587062 ZNF215Q9UL58 517 aaPredicted RBP23.18■■□□□ 1.3
VAT1-203ENST00000587062 ESYT2A0FGR8 921 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 PITPNM1O00562 1244 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 SORBS3O60504 671 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 CYP2C9P11712 490 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 ZNF76P36508 570 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 CCL23P55773 120 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 CCT2P78371 535 aaKnown RBP23.17■■□□□ 1.3
VAT1-203ENST00000587062 SSRP1Q08945 709 aaKnown RBP23.17■■□□□ 1.3
VAT1-203ENST00000587062 CAGE1Q8TC20 777 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 KAT2BQ92831 832 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 SLC26A6Q9BXS9 759 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
VAT1-203ENST00000587062 JADE2Q9NQC1 790 aa23.17■■□□□ 1.3
VAT1-203ENST00000587062 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.16■■□□□ 1.3
VAT1-203ENST00000587062 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.16■■□□□ 1.3
VAT1-203ENST00000587062 H3BRB1 525 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 ZNF286BP0CG31 522 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 RFC2P35250 354 aa23.16■■□□□ 1.3
VAT1-203ENST00000587062 SMAD3P84022 425 aaKnown RBP23.16■■□□□ 1.3
VAT1-203ENST00000587062 TOB2Q14106 344 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms