RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 SLC39A5Q6ZMH5 540 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 NAP1L4Q99733 375 aaKnown RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 MXRA8Q9BRK3 442 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 MTG1Q9BT17 334 aaPredicted RBP16.08■□□□□ 0.16
TPM4-205ENST00000586833 KATNAL1Q9BW62 490 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 JADE2Q9NQC1 790 aa16.08■□□□□ 0.16
TPM4-205ENST00000586833 CCDC194A0A1B0GVG4 234 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 A6NJR5 290 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
TPM4-205ENST00000586833 ARIH2O95376 493 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 LARGE1O95461 756 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 GGPS1O95749 300 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
TPM4-205ENST00000586833 BEX3Q00994 111 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 CELF3Q5SZQ8 465 aaKnown RBP16.07■□□□□ 0.16
TPM4-205ENST00000586833 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 CCSAPQ6IQ19 270 aaPredicted RBP16.07■□□□□ 0.16
TPM4-205ENST00000586833 METTL7BQ6UX53 244 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 SDF4Q9BRK5 362 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 UBIAD1Q9Y5Z9 338 aa16.07■□□□□ 0.16
TPM4-205ENST00000586833 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 CYP3A4P08684 503 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 UBA1P22314 1058 aaKnown RBP16.06■□□□□ 0.16
TPM4-205ENST00000586833 KRT2P35908 639 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 USP11P51784 963 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 ARHGAP1Q07960 439 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.162e-8■■■■■ 32.1
TPM4-205ENST00000586833 AFG1LQ8WV93 481 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 COPS5Q92905 334 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 ATP11BQ9Y2G3 1177 aa16.06■□□□□ 0.16
TPM4-205ENST00000586833 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
TPM4-205ENST00000586833 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 RGS20O76081 388 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 MMP3P08254 477 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 RTP1P59025 263 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 C7orf61Q8IZ16 206 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
TPM4-205ENST00000586833 ARVCFO00192 962 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 CTAGE5O15320 804 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 JAK2O60674 1132 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 ITGB5P18084 799 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 GNL2Q13823 731 aaKnown RBP16.04■□□□□ 0.16
TPM4-205ENST00000586833 SNX17Q15036 470 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 LRRC26Q2I0M4 334 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 PLA2G4DQ86XP0 818 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
TPM4-205ENST00000586833 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
TPM4-205ENST00000586833 KCNJ14Q9UNX9 436 aa16.04■□□□□ 0.16
TPM4-205ENST00000586833 MEIS1O00470 390 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
TPM4-205ENST00000586833 PURAQ00577 322 aaKnown RBP16.03■□□□□ 0.16
TPM4-205ENST00000586833 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 PRPF38BQ5VTL8 546 aaKnown RBP16.03■□□□□ 0.16
TPM4-205ENST00000586833 CYFIP1Q7L576 1253 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 RASGRP4Q8TDF6 673 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 TOX2Q96NM4 488 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
TPM4-205ENST00000586833 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
TPM4-205ENST00000586833 ZNFX1Q9P2E3 1918 aaKnown RBP16.03■□□□□ 0.16
TPM4-205ENST00000586833 KIAA0100Q14667 2235 aaKnown RBP16.02■□□□□ 0.16
TPM4-205ENST00000586833 NFASCO94856 1347 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 PQBP1O60828 265 aaKnown RBP16.02■□□□□ 0.16
TPM4-205ENST00000586833 MMP1P03956 469 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 SUPT20HL2P0C7V6 817 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 GCFC2P16383 781 aaKnown RBP16.02■□□□□ 0.16
TPM4-205ENST00000586833 CIITAP33076 1130 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 PTPN11Q06124 597 aaPredicted RBP16.02■□□□□ 0.16
TPM4-205ENST00000586833 MOXD1Q6UVY6 613 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 ANKRD33Q7Z3H0 272 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 ZNF577Q9BSK1 485 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
TPM4-205ENST00000586833 TBC1D22BQ9NU19 505 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 SMC3Q9UQE7 1217 aa16.02■□□□□ 0.16
TPM4-205ENST00000586833 CLTBP09497 229 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 KCNA2P16389 499 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 SP2Q02086 613 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 PRR16Q569H4 304 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 FAM47CQ5HY64 1035 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 KRT40Q6A162 431 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 NFRKBQ6P4R8 1299 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
TPM4-205ENST00000586833 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms