RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
ACTN4-209ENST00000586538 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN4-209ENST00000586538 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
ACTN4-209ENST00000586538 PHOSPHO2Q8TCD6 241 aa12.96□□□□□ -0.33
ACTN4-209ENST00000586538 MYLIPQ8WY64 445 aa12.96□□□□□ -0.33
ACTN4-209ENST00000586538 SCLYQ96I15 445 aa12.96□□□□□ -0.33
ACTN4-209ENST00000586538 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN4-209ENST00000586538 GTF2IRD1Q9UHL9 959 aa12.96□□□□□ -0.33
ACTN4-209ENST00000586538 IQCF3P0C7M6 154 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 GNAT1P11488 350 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
ACTN4-209ENST00000586538 ICAM3P32942 547 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 KCNJ6P48051 423 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 PSEN2P49810 448 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 RBL2Q08999 1139 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 PTK7Q13308 1070 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 PCNX4Q63HM2 1172 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 METTL7BQ6UX53 244 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 INPP4AQ96PE3 977 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-209ENST00000586538 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 GLT8D2Q9H1C3 349 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 SENP2Q9HC62 589 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-209ENST00000586538 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
ACTN4-209ENST00000586538 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 SPDYE3A6NKU9 549 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 DLL1O00548 723 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 MAFGO15525 162 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 SELPP16109 830 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
ACTN4-209ENST00000586538 RCAN1P53805 252 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 FGD1P98174 961 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 DEFB128Q7Z7B8 93 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 SENP7Q9BQF6 1050 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 MYL10Q9BUA6 226 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
ACTN4-209ENST00000586538 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 HAS3O00219 553 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 CAND2O75155 1236 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 RGS20O76081 388 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 TSGA10IPQ3SY00 556 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 PPP2R2DQ66LE6 453 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 GDF6Q6KF10 455 aaPredicted RBP12.93□□□□□ -0.34
ACTN4-209ENST00000586538 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 DHX32Q7L7V1 743 aaKnown RBP12.93□□□□□ -0.34
ACTN4-209ENST00000586538 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 KAT2BQ92831 832 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
ACTN4-209ENST00000586538 GPRASP2Q96D09 838 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
ACTN4-209ENST00000586538 HDAC6Q9UBN7 1215 aa12.93□□□□□ -0.34
ACTN4-209ENST00000586538 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
ACTN4-209ENST00000586538 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 C17orf102A2RUQ5 167 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 H3BRB1 525 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 ZBTB43O43298 467 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 SLC35G1Q2M3R5 365 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 CNKSR3Q6P9H4 555 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
ACTN4-209ENST00000586538 SYMPKQ92797 1274 aaKnown RBP12.92□□□□□ -0.34
ACTN4-209ENST00000586538 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-209ENST00000586538 TUT1Q9H6E5 874 aaKnown RBP12.92□□□□□ -0.34
ACTN4-209ENST00000586538 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 MEIS2O14770 477 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 REC8O95072 547 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 FOSP01100 380 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-209ENST00000586538 LGALS2P05162 132 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 RPLP2P05387 115 aaKnown RBP12.91□□□□□ -0.34
ACTN4-209ENST00000586538 NEFLP07196 543 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 CKBP12277 381 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 PBX2P40425 430 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 MRPS9P82933 396 aaKnown RBP12.91□□□□□ -0.34
ACTN4-209ENST00000586538 RTN1Q16799 776 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
ACTN4-209ENST00000586538 IL31RAQ8NI17 732 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 CDH23Q9H251 3354 aa12.91□□□□□ -0.34
ACTN4-209ENST00000586538 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
ACTN4-209ENST00000586538 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-209ENST00000586538 RXRAP19793 462 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 PSMA5P28066 241 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 IKBKEQ14164 716 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms