RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 HSD17B4P51659 736 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
LIG3-207ENST00000586119 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
LIG3-207ENST00000586119 DHX37Q8IY37 1157 aaKnown RBP13.54□□□□□ -0.24
LIG3-207ENST00000586119 C7orf31Q8N865 590 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 PDCD2LQ9BRP1 358 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 TAF6LQ9Y6J9 622 aa13.54□□□□□ -0.24
LIG3-207ENST00000586119 COL4A4P53420 1690 aaPredicted RBP13.53□□□□□ -0.24
LIG3-207ENST00000586119 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
LIG3-207ENST00000586119 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 LAMC2Q13753 1193 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 IFIT1BQ5T764 474 aaKnown RBP13.53□□□□□ -0.24
LIG3-207ENST00000586119 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 KHSRPQ92945 711 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIG3-207ENST00000586119 PIGSQ96S52 555 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 AMNQ9BXJ7 453 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
LIG3-207ENST00000586119 CYTH3O43739 400 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 GGPS1O95749 300 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 F2P00734 622 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PDE4AP27815 886 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PTH1RQ03431 593 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 RBL2Q08999 1139 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PTK7Q13308 1070 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PGM5Q15124 567 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
LIG3-207ENST00000586119 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 VSIG10LQ86VR7 867 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PPTC7Q8NI37 304 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
LIG3-207ENST00000586119 UBAC1Q9BSL1 405 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 KRT23Q9C075 422 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 BDP1A6H8Y1 2624 aa13.52□□□□□ -0.25
LIG3-207ENST00000586119 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 MICAL3Q7RTP6 2002 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 ZBTB5O15062 677 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 GJB5O95377 273 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
LIG3-207ENST00000586119 GHRHRQ02643 423 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 AAMPQ13685 434 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 SPATA33Q96N06 139 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 MAF1Q9H063 256 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 CTNNA3Q9UI47 895 aa13.51□□□□□ -0.25
LIG3-207ENST00000586119 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
LIG3-207ENST00000586119 UBA1P22314 1058 aaKnown RBP13.5□□□□□ -0.25
LIG3-207ENST00000586119 THPOP40225 353 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 IKBKEQ14164 716 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 AAK1Q2M2I8 961 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 HLA-CQ95604 372 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 RAD9AQ99638 391 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 C17orf80Q9BSJ5 609 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 SIP14410 1827 aa13.5□□□□□ -0.25
LIG3-207ENST00000586119 HIP1O00291 1037 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 TREHO43280 583 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 LGR5O75473 907 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 CYP21A2P08686 494 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 ERVK-21P61565 698 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
LIG3-207ENST00000586119 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
LIG3-207ENST00000586119 GRM4Q14833 912 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 RNPEPQ9H4A4 650 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 COG5Q9UP83 839 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
LIG3-207ENST00000586119 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
LIG3-207ENST00000586119 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
LIG3-207ENST00000586119 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 SMIM10L2AP0DMW4 78 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 SMIM10L2BP0DMW5 78 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 NT5C2P49902 561 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
LIG3-207ENST00000586119 SERINC5Q86VE9 423 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
LIG3-207ENST00000586119 ATP6V0A1Q93050 837 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms