RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RAD9BQ6WBX8 426 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 CTAGE15A4D2H0 777 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 ZBED4O75132 1171 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 ENTPD3O75355 529 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 CTAGE8P0CG41 777 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 GABPAQ06546 454 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 NAALADL2Q58DX5 795 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 KCNK18Q7Z418 384 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 CTAGE6Q86UF2 777 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 CTAGE4Q8IX94 777 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 ABCB11O95342 1321 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 TMCO5BA8MYB1 307 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 MAGEA1P43355 309 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
SMARCA4-208ENST00000585799 YDJCA8MPS7 323 aa13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 PPP1R11O60927 126 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 FAM151AQ8WW52 585 aa13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 BICD1Q96G01 975 aa13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 NDST4Q9H3R1 872 aa13.77□□□□□ -0.2
SMARCA4-208ENST00000585799 SHTN1A0MZ66 631 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 LGALS16A8MUM7 142 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 RHOBTB3O94955 611 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 GYPCP04921 128 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 ZNF18P17022 549 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 SH3BP5LQ7L8J4 393 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 GLIS2Q9BZE0 524 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 ABHD10Q9NUJ1 306 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 COL4A1P02462 1669 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 ESYT2A0FGR8 921 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 C4orf32Q8N8J7 132 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 BANK1Q8NDB2 785 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
SMARCA4-208ENST00000585799 A0A1W2PRG0 241 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 EPB41P11171 864 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 FKBP3Q00688 224 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 ODR4Q5SWX8 454 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 FAM178BQ8IXR5 827 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 GIMAP8Q8ND71 665 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 MYL1P05976 194 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 GOLGA1Q92805 767 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 PAPPAQ13219 1627 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 BUB1O43683 1085 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 EXOC3O60645 756 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 TACC1O75410 805 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 GPS2Q13227 327 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 GOLGA6L1Q8N7Z2 621 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 MED15Q96RN5 788 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 NUP58Q9BVL2 599 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 IFIH1Q9BYX4 1025 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 ADGRG1Q9Y653 693 aa13.76□□□□□ -0.21
SMARCA4-208ENST00000585799 MYO3BQ8WXR4 1341 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 HARSP12081 509 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 KCNB1Q14721 858 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 TAF4BQ92750 862 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 SMARCA1P28370 1054 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 DGKZQ13574 1117 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 MAN2A1Q16706 1144 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 TEKT3Q9BXF9 490 aa13.75□□□□□ -0.21
SMARCA4-208ENST00000585799 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms