RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 HEATR3Q7Z4Q2 680 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 NLRX1Q86UT6 975 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 CCDC12Q8WUD4 166 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 GPRASP2Q96D09 838 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 CYP46A1Q9Y6A2 500 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 LAMA3Q16787 3333 aa19.25■□□□□ 0.67
CSNK1D-225ENST00000584913 PITPNM1O00562 1244 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 PSMC6P62333 389 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 NBPF20Q3BBV1 942 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 FAM109BQ6ICB4 259 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 PSRC1Q6PGN9 363 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 RAB11FIP4Q86YS3 637 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 FAM177A1Q8N128 213 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 CCDC82Q8N4S0 544 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 NOC4LQ9BVI4 516 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 RNF26Q9BY78 433 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 HIPK3Q9H422 1215 aa19.24■□□□□ 0.67
CSNK1D-225ENST00000584913 STXBP3O00186 592 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 HAS3O00219 553 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 GGPS1O95749 300 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 PFKMP08237 780 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 NAPAP54920 295 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 METTL7BQ6UX53 244 aa19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 ZNF274Q96GC6 653 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 V9GY48 417 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-225ENST00000584913 PRPF3O43395 683 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 SCG2P13521 617 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 CPA1P15085 419 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 IFNAR1P17181 557 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 RFC2P35250 354 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 CLK2P49760 499 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 ADCY7P51828 1080 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 SMAD3P84022 425 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 RBL2Q08999 1139 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 SHHQ15465 462 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 CCDC155Q8N6L0 562 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 KAT2BQ92831 832 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 GPKOWQ92917 476 aaPredicted RBP eCLIP19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 SPATA33Q96N06 139 aa19.22■□□□□ 0.67
CSNK1D-225ENST00000584913 TMEM265A0A087WTH1 108 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 ADD1P35611 737 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 HSDL1Q3SXM5 330 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 CAGE1Q8TC20 777 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 TRPV6Q9H1D0 765 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 MLXIPQ9HAP2 919 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 IL23AQ9NPF7 189 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 UBIAD1Q9Y5Z9 338 aa19.21■□□□□ 0.67
CSNK1D-225ENST00000584913 TANC1Q9C0D5 1861 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 hCG_1642624A0A1W2PR95 340 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 PARNO95453 639 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 PDIA3P30101 505 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 SP2Q02086 613 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 BFSP2Q13515 415 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 TOB2Q14106 344 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 NTRK3Q16288 839 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 C9orf50Q5SZB4 431 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 RASIP1Q5U651 963 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 TYW1BQ6NUM6 668 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 CCDC148Q8NFR7 591 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 ZMYND12Q9H0C1 365 aa19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 MTIF3Q9H2K0 278 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-225ENST00000584913 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 PSEN2P49810 448 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 AKAP17AQ02040 695 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 MFSD10Q14728 455 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 UBE2SQ16763 222 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 FAM47CQ5HY64 1035 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 RPUSD2Q8IZ73 545 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 RNPC3Q96LT9 517 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 PPP1R12CQ9BZL4 782 aa19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 TRMT13Q9NUP7 481 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 NAP1L2Q9ULW6 460 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-225ENST00000584913 NOP56O00567 594 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 CSF2RAP15509 400 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 GNA11P29992 359 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 HOXC8P31273 242 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 SREBF1P36956 1147 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 EPHB4P54760 987 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 KIAA0753Q2KHM9 967 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 TMEM240Q5SV17 173 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 NIPA1Q7RTP0 329 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 C7orf31Q8N865 590 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 AFAP1L1Q8TED9 768 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 C16orf70Q9BSU1 422 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 WNT8AQ9H1J5 351 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 C6orf50Q9HD87 102 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 JADE2Q9NQC1 790 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 SH3GLB2Q9NR46 395 aa19.18■□□□□ 0.66
CSNK1D-225ENST00000584913 KCNA2P16389 499 aa19.17■□□□□ 0.66
CSNK1D-225ENST00000584913 ITGB5P18084 799 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms