RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 GTF2IRD1Q9UHL9 959 aa15.21■□□□□ 0.03
CDK5RAP3-234ENST00000584525 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-234ENST00000584525 MRPL11Q9Y3B7 192 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-234ENST00000584525 HCN4Q9Y3Q4 1203 aa15.21■□□□□ 0.03
CDK5RAP3-234ENST00000584525 MRVI1Q9Y6F6 885 aa15.21■□□□□ 0.03
CDK5RAP3-234ENST00000584525 REV3LO60673 3130 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SLC27A2O14975 620 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 EIF3JO75822 258 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 GJB5O95377 273 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LAMC2Q13753 1193 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 IKBKEQ14164 716 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 KRT32Q14532 448 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 MFSD10Q14728 455 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 WTAPQ15007 396 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 KIAA0753Q2KHM9 967 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TMEM31Q5JXX7 168 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 FBXO11Q86XK2 927 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 DHX37Q8IY37 1157 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LMCD1Q9NZU5 365 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TRANK1O15050 2925 aa15.2■□□□□ 0.02
CDK5RAP3-234ENST00000584525 EFCAB14O75071 495 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 NR3C2P08235 984 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 MCM5P33992 734 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 FGD1P98174 961 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 RBL2Q08999 1139 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PTK7Q13308 1070 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TCTN1Q2MV58 587 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 NFXL1Q6ZNB6 911 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 EMID1Q96A84 441 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-234ENST00000584525 NCOR1O75376 2440 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LCTP09848 1927 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LINC01553A4QN01 128 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SORBS3O60504 671 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CFBP00751 764 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ERVK-21P61565 698 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ANKS1AQ92625 1134 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PXMP2Q9NR77 195 aa15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PRRC2BQ5JSZ5 2229 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PRC1O43663 620 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 F2P00734 622 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 MYCLP12524 364 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SYNE3Q6ZMZ3 975 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CYB5R4Q7L1T6 521 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 WNT8BQ93098 351 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SCN10AQ9Y5Y9 1956 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 GBF1Q92538 1859 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 FAM86C2PA6NEL3 165 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 HAS3O00219 553 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LGR5O75473 907 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 THPOP40225 353 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TRIM71Q2Q1W2 868 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TRAF7Q6Q0C0 670 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 MYOCDQ8IZQ8 938 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 NEK1Q96PY6 1258 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 UBE2ZQ9H832 354 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 INSL6Q9Y581 213 aa15.16■□□□□ 0.02
CDK5RAP3-234ENST00000584525 RSPH10B2B2RC85 870 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 GPR37L1O60883 481 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 AMHP03971 560 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 RSPH10BP0C881 870 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 KCNA5P22460 613 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 MBTPS1Q14703 1052 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CELF3Q5SZQ8 465 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 STOX1Q6ZVD7 989 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 ARIH1Q9Y4X5 557 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 EMSYQ7Z589 1322 aa15.15■□□□□ 0.02
CDK5RAP3-234ENST00000584525 SCN5AQ14524 2016 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PI4K2BG5E9Z4 385 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GGPS1O95749 300 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PSMA5P28066 241 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms