RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PTCH2	Q9Y6C5	1203 aa		11.36	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MYH7B	A7E2Y1	1941 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	POTEF	A5A3E0	1075 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	TBX3	O15119	743 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	DHX15	O43143	795 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	HMGCR	P04035	888 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	GRK4	P32298	578 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CACNB2	Q08289	660 aa	Predicted RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ACVR2B	Q13705	512 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	IQSEC1	Q6DN90	963 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	KCNV1	Q6PIU1	500 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CLEC17A	Q6ZS10	378 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	ETNPPL	Q8TBG4	499 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	EMID1	Q96A84	441 aa	Predicted RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MPHOSPH6	Q99547	160 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	DDX41	Q9UJV9	622 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	GNE	Q9Y223	722 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054		Q9Y3F1	56 aa		11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	DDX49	Q9Y6V7	483 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-231	ENST00000584054	VPS37C	A5D8V6	355 aa	Predicted RBP	11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	HOXD8	P13378	290 aa	Predicted RBP	11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	KCNA2	P16389	499 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CYP2C19	P33261	490 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	FOSB	P53539	338 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PDE4D	Q08499	809 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	PTPA	Q15257	358 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	HAS1	Q92839	578 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	SLC5A5	Q92911	643 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	CDHR1	Q96JP9	859 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	KCNH7	Q9NS40	1196 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	NFASC	O94856	1347 aa		11.34	□□□□□ -0.59
EIF4A1-231	ENST00000584054	MSH4	O15457	936 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ADCY6	O43306	1168 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	FIBP	O43427	364 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SLC37A4	O43826	429 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ATP9A	O75110	1047 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ARIH2	O95376	493 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TDP2	O95551	362 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	AR	P10275	920 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ELN	P15502	786 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	NASP	P49321	788 aa	Predicted RBP	11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SET	Q01105	290 aa	Predicted RBP	11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SP2	Q02086	613 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TRIM32	Q13049	653 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	DUSP28	Q4G0W2	176 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	MFSD14C	Q5VZR4	134 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	FERMT3	Q86UX7	667 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	RAET1E	Q8TD07	263 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SCFD2	Q8WU76	684 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	FAM20A	Q96MK3	541 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	WDR11	Q9BZH6	1224 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	AGO4	Q9HCK5	861 aa	Known RBP	11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PAK6	Q9NQU5	681 aa	Predicted RBP	11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PDGFC	Q9NRA1	345 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	POLR3E	Q9NVU0	708 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	RTEL1	Q9NZ71	1219 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	CHMP5	Q9NZZ3	219 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PCDHB6	Q9Y5E3	794 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	KIAA1217	Q5T5P2	1943 aa		11.33	□□□□□ -0.6
EIF4A1-231	ENST00000584054	LAD1	O00515	517 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	NKRF	O15226	690 aa	Known RBP eCLIP	11.32	□□□□□ -0.6	5e-6	■□□□□ 8.5
EIF4A1-231	ENST00000584054	CTAGE5	O15320	804 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SEPT4	O43236	478 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PSMD10	O75832	226 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ATG7	O95352	703 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	INHA	P05111	366 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PRPH	P41219	470 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	UBXN2A	P68543	259 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ATP2C1	P98194	919 aa	Predicted RBP	11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SPIRE1	Q08AE8	756 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ITGB3BP	Q13352	177 aa	Predicted RBP	11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	LETM2	Q2VYF4	491 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	GNPTAB	Q3T906	1256 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TTC38	Q5R3I4	469 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PRAMEF19	Q5SWL8	479 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	LHX8	Q68G74	356 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	NLRX1	Q86UT6	975 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ZNF333	Q96JL9	665 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	RIT2	Q99578	217 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	UPF3A	Q9H1J1	476 aa	Known RBP	11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TMEM60	Q9H2L4	133 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	RCOR1	Q9UKL0	485 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	NOL7	Q9UMY1	257 aa	Known RBP	11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	MCM3AP	O60318	1980 aa		11.32	□□□□□ -0.6
EIF4A1-231	ENST00000584054	DUSP11	O75319	330 aa	Known RBP	11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	BMP15	O95972	392 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	MYCL	P12524	364 aa	Predicted RBP	11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	PRKAR2A	P13861	404 aa	Known RBP	11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SMPD1	P17405	629 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	CAPN2	P17655	700 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ARHGAP1	Q07960	439 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	MTMR1	Q13613	665 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TTLL4	Q14679	1199 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	SLC39A14	Q15043	492 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	CCDC144B	Q3MJ40	725 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	TMEM63B	Q5T3F8	832 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	MCTP1	Q6DN14	999 aa		11.31	□□□□□ -0.6
EIF4A1-231	ENST00000584054	FAM173B	Q6P4H8	233 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms