RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MYOGP15173 224 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 SLC16A2P36021 539 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 ALDH5A1P51649 535 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 TTBK2Q6IQ55 1244 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 KIAA1211Q6ZU35 1233 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 VWCEQ96DN2 955 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 RANBP17Q9H2T7 1088 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 SLC28A3Q9HAS3 691 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 VTA1Q9NP79 307 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 TRMT13Q9NUP7 481 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 KIAA1217Q5T5P2 1943 aa9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 FRMPD2Q68DX3 1309 aaPredicted RBP9.2□□□□□ -0.94
SMCHD1-210ENST00000583800 LAMA4Q16363 1823 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 NFIBO00712 420 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 ICAM1P05362 532 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 CYP2C9P11712 490 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 MX1P20591 662 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 BAATQ14032 418 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 DUSP28Q4G0W2 176 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 ADAMTS19Q8TE59 1207 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 PPP1R13LQ8WUF5 828 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 DCAF4Q8WV16 495 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 ATXN2LQ8WWM7 1075 aaKnown RBP9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 ASB2Q96Q27 587 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 ALDH8A1Q9H2A2 487 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 Q9Y3F1 56 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 PCDHB15Q9Y5E8 787 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 SLC4A7Q9Y6M7 1214 aa9.19□□□□□ -0.94
SMCHD1-210ENST00000583800 REV3LO60673 3130 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 PTPDC1A2A3K4 754 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 MYH7BA7E2Y1 1941 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 SPTLC1O15269 473 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 TLL1O43897 1013 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 GDF9O60383 454 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 TNKSO95271 1327 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 MYL3P08590 195 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 CALML3P27482 149 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 NOVP48745 357 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 PURAQ00577 322 aaKnown RBP9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 TTLL4Q14679 1199 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 RRP12Q5JTH9 1297 aaKnown RBP9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 SYDE2Q5VT97 1194 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 DEFB128Q7Z7B8 93 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 RPUSD2Q8IZ73 545 aaKnown RBP9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 SPIRE2Q8WWL2 714 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 SALL3Q9BXA9 1300 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 SEZ6LQ9BYH1 1024 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 TOMM22Q9NS69 142 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 RAPGEFL1Q9UHV5 662 aa9.18□□□□□ -0.94
SMCHD1-210ENST00000583800 RFXAPO00287 272 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 ORC4O43929 436 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 MRPS5P82675 430 aaKnown RBP9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 FAM47CQ5HY64 1035 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 BTNL9Q6UXG8 535 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 SND1Q7KZF4 910 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 CLEC4DQ8WXI8 215 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 COPS5Q92905 334 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 UHRF1Q96T88 793 aaPredicted RBP9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 TMEM47Q9BQJ4 181 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 ADD3Q9UEY8 706 aaKnown RBP9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 PCDHA11Q9Y5I1 949 aa9.17□□□□□ -0.94
SMCHD1-210ENST00000583800 A0A0D9SFI3 127 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 CA3P07451 260 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 PFKMP08237 780 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 FGRP09769 529 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 PDHBP11177 359 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 TOP1P11387 765 aaKnown RBP9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 RFX1P22670 979 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 CPT1AP50416 773 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 TFF2Q03403 129 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 PPP2R5BQ15173 497 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 NBPF20Q3BBV1 942 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 FAM227BQ96M60 508 aa9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 NECAB3Q96P71 396 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 MTG1Q9BT17 334 aaPredicted RBP9.16□□□□□ -0.94
SMCHD1-210ENST00000583800 SIP14410 1827 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 RAD50Q92878 1312 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 EPOPA6NHQ4 379 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 ARHGEF15O94989 841 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 ARIH2O95376 493 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 S1PR4O95977 384 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms