RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 POLR2MP0CAP2 368 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 FOSL2P15408 326 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 AK2P54819 239 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 OR6J1Q8NGC5 347 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 NSUN6Q8TEA1 469 aaKnown RBP28.6■■■□□ 2.17
TSEN54-209ENST00000583454 SCFD2Q8WU76 684 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 COPS5Q92905 334 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 TIFAQ96CG3 184 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 RMDN3Q96TC7 470 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 COL25A1Q9BXS0 654 aaPredicted RBP28.6■■■□□ 2.17
TSEN54-209ENST00000583454 NCOA5Q9HCD5 579 aaKnown RBP28.6■■■□□ 2.17
TSEN54-209ENST00000583454 TTC28Q96AY4 2481 aa28.6■■■□□ 2.17
TSEN54-209ENST00000583454 B4DLN1 442 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 IFNAR1P17181 557 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 HOXA13P31271 388 aaPredicted RBP28.59■■■□□ 2.17
TSEN54-209ENST00000583454 CPT1AP50416 773 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 MRPL12P52815 198 aaKnown RBP28.59■■■□□ 2.17
TSEN54-209ENST00000583454 CCL23P55773 120 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 MPHOSPH6Q99547 160 aaKnown RBP28.59■■■□□ 2.17
TSEN54-209ENST00000583454 ZNF576Q9H609 170 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 TRMT13Q9NUP7 481 aaKnown RBP28.59■■■□□ 2.17
TSEN54-209ENST00000583454 TPCN1Q9ULQ1 816 aa28.59■■■□□ 2.17
TSEN54-209ENST00000583454 A6NJR5 290 aa28.58■■■□□ 2.17
TSEN54-209ENST00000583454 NKRFO15226 690 aaKnown RBP eCLIP28.58■■■□□ 2.17
TSEN54-209ENST00000583454 PRPF3O43395 683 aaKnown RBP28.58■■■□□ 2.17
TSEN54-209ENST00000583454 WWC2Q6AWC2 1192 aa28.58■■■□□ 2.17
TSEN54-209ENST00000583454 HEATR3Q7Z4Q2 680 aa28.58■■■□□ 2.17
TSEN54-209ENST00000583454 GPKOWQ92917 476 aaPredicted RBP eCLIP28.58■■■□□ 2.17
TSEN54-209ENST00000583454 IWS1Q96ST2 819 aa28.58■■■□□ 2.17
TSEN54-209ENST00000583454 hCG_1984214I3L0E3 225 aa28.57■■■□□ 2.16
TSEN54-209ENST00000583454 PIK3CDO00329 1044 aa28.57■■■□□ 2.16
TSEN54-209ENST00000583454 MYL3P08590 195 aa28.57■■■□□ 2.16
TSEN54-209ENST00000583454 CCDC62Q6P9F0 684 aa28.57■■■□□ 2.16
TSEN54-209ENST00000583454 ZNF713Q8N859 430 aaPredicted RBP28.57■■■□□ 2.16
TSEN54-209ENST00000583454 MTG1Q9BT17 334 aaPredicted RBP28.57■■■□□ 2.16
TSEN54-209ENST00000583454 PXMP2Q9NR77 195 aa28.57■■■□□ 2.16
TSEN54-209ENST00000583454 MEIS2O14770 477 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 PFKFB2O60825 505 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 PFKFB3Q16875 520 aaPredicted RBP28.56■■■□□ 2.16
TSEN54-209ENST00000583454 TYW1BQ6NUM6 668 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 PHKBQ93100 1093 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 RNF26Q9BY78 433 aaPredicted RBP28.56■■■□□ 2.16
TSEN54-209ENST00000583454 PSTPIP2Q9H939 334 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 UPF2Q9HAU5 1272 aaKnown RBP28.56■■■□□ 2.16
TSEN54-209ENST00000583454 BARHL2Q9NY43 387 aa28.56■■■□□ 2.16
TSEN54-209ENST00000583454 FGBP02675 491 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 TXNP10599 105 aaKnown RBP28.55■■■□□ 2.16
TSEN54-209ENST00000583454 CYP2C9P11712 490 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 STK3Q13188 491 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 PKN1Q16512 942 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 ARHGEF16Q5VV41 709 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 PPP1R18Q6NYC8 613 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 PPP1R13LQ8WUF5 828 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 SCLYQ96I15 445 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 TET1Q8NFU7 2136 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 TRIP12Q14669 1992 aaPredicted RBP28.55■■■□□ 2.16
TSEN54-209ENST00000583454 MYH7BA7E2Y1 1941 aa28.55■■■□□ 2.16
TSEN54-209ENST00000583454 STXBP3O00186 592 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 SCG2P13521 617 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 NBPF20Q3BBV1 942 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 USP17L6PQ6QN14 398 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 TEX2Q8IWB9 1127 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 BACH2Q9BYV9 841 aa28.54■■■□□ 2.16
TSEN54-209ENST00000583454 SLKQ9H2G2 1235 aaPredicted RBP28.54■■■□□ 2.16
TSEN54-209ENST00000583454 MUC3AQ02505 3323 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 NR3C2P08235 984 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 EIF2AK2P19525 551 aaKnown RBP28.53■■■□□ 2.16
TSEN54-209ENST00000583454 SCRN1Q12765 414 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 OTOP2Q7RTS6 562 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 FCHSD1Q86WN1 690 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 USP38Q8NB14 1042 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 CUL5Q93034 780 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 PDCD2LQ9BRP1 358 aa28.53■■■□□ 2.16
TSEN54-209ENST00000583454 FRMPD4Q14CM0 1322 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 CPLX1O14810 134 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 NAPAP54920 295 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 AKAP17AQ02040 695 aaKnown RBP28.52■■■□□ 2.16
TSEN54-209ENST00000583454 TTLL4Q14679 1199 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 STXBP2Q15833 593 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 SLC26A6Q9BXS9 759 aa28.52■■■□□ 2.16
TSEN54-209ENST00000583454 KPNA6O60684 536 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 SUPT20HL2P0C7V6 817 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 ARHGAP1Q07960 439 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 ME3Q16798 604 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 NFRKBQ6P4R8 1299 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 CPLX2Q6PUV4 134 aaKnown RBP28.51■■■□□ 2.15
TSEN54-209ENST00000583454 VSIG10LQ86VR7 867 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 SMARCC2Q8TAQ2 1214 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 RIC8AQ9NPQ8 531 aa28.51■■■□□ 2.15
TSEN54-209ENST00000583454 YBX2Q9Y2T7 364 aaKnown RBP28.51■■■□□ 2.15
TSEN54-209ENST00000583454 PTPRSQ13332 1948 aa28.5■■■□□ 2.15
TSEN54-209ENST00000583454 PPFIA3O75145 1194 aa28.5■■■□□ 2.15
TSEN54-209ENST00000583454 EIF3JO75822 258 aaKnown RBP28.5■■■□□ 2.15
TSEN54-209ENST00000583454 PGM5Q15124 567 aa28.5■■■□□ 2.15
TSEN54-209ENST00000583454 BRDTQ58F21 947 aaPredicted RBP28.5■■■□□ 2.15
TSEN54-209ENST00000583454 TBC1D32Q96NH3 1257 aa28.5■■■□□ 2.15
TSEN54-209ENST00000583454 SSRP1Q08945 709 aaKnown RBP28.49■■■□□ 2.15
TSEN54-209ENST00000583454 LY6KQ17RY6 165 aa28.49■■■□□ 2.15
TSEN54-209ENST00000583454 TRIM22Q8IYM9 498 aa28.49■■■□□ 2.15
TSEN54-209ENST00000583454 RPUSD2Q8IZ73 545 aaKnown RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms