RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 HOXC6P09630 235 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ITGB5P18084 799 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 STXBP2Q15833 593 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PRR16Q569H4 304 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TMEM87AQ8NBN3 555 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 NPLOC4Q8TAT6 608 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 KCNG4Q8TDN1 519 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SOCS4Q8WXH5 440 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MPHOSPH6Q99547 160 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MRVI1Q9Y6F6 885 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PLXNB2O15031 1838 aa18.53■□□□□ 0.56
CDK5RAP3-228ENST00000583363 TRIOBPQ9H2D6 2365 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 LAD1O00515 517 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MARCKSP29966 332 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PDE4DQ08499 809 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 CALCRLQ16602 461 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MAMDC4Q6UXC1 1216 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 PLA2G4DQ86XP0 818 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 HAS1Q92839 578 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 MAML3Q96JK9 1138 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 SRRDQ9UH36 339 aa18.52■□□□□ 0.56
CDK5RAP3-228ENST00000583363 ELP1O95163 1332 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 TBX3O15119 743 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PRPF40AO75400 957 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 RGS20O76081 388 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 OR52Z1P0C646 297 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ARP10275 920 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MCM4P33991 863 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PRPHP41219 470 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 RGS2P41220 211 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 NLRX1Q86UT6 975 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MSL3Q8N5Y2 521 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 WDR11Q9BZH6 1224 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SRPRBQ9Y5M8 271 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MGAMO43451 1857 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MSH4O15457 936 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MAFGO15525 162 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CYP2B6P20813 491 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 IL17AQ16552 155 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ETNPPLQ8TBG4 499 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GPRASP2Q96D09 838 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FAM20AQ96MK3 541 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 LMBRD1Q9NUN5 540 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FBXO2Q9UK22 296 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ZNF236Q9UL36 1845 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SPATA31C2B4DYI2 1134 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GOLGA6L22H0YM25 854 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 IGHA2P01877 340 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 XRCC5P13010 732 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 HOXD10P28358 340 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ICAM3P32942 547 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ME1P48163 572 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ARMCX2Q7L311 632 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 KRI1Q8N9T8 703 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 TINF2Q9BSI4 451 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 AGO4Q9HCK5 861 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 KCNH7Q9NS40 1196 aa18.49■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MARCH6O60337 910 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CUTAO60888 179 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GRK4P32298 578 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 TXKP42681 527 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FLT3LGP49771 235 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 MTMR1Q13613 665 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GNPTABQ3T906 1256 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 OLFML2BQ68BL8 750 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ADALQ6DHV7 355 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SLFN12Q8IYM2 578 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SLC5A5Q92911 643 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GJA10Q969M2 543 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CLIC6Q96NY7 704 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 UIMC1Q96RL1 719 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FLRT1Q9NZU1 646 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PLXNA1Q9UIW2 1896 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SYNGAP1Q96PV0 1343 aa18.48■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GADD45BO75293 160 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PRKCZQ05513 592 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GRIN1Q05586 938 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 SEPT14Q6ZU15 432 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ZNF579Q8NAF0 562 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CDHR1Q96JP9 859 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 APBA2Q99767 749 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 ZNF577Q9BSK1 485 aa18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-228ENST00000583363 VWA3AA6NCI4 1184 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms