RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KRT40Q6A162 431 aa11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TET1Q8NFU7 2136 aa11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 IL25Q9H293 177 aa11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MAP3K20Q9NYL2 800 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HAS3O00219 553 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 NBNO60934 754 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 F2P00734 622 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ZNF286BP0CG31 522 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HSD17B4P51659 736 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 DEFB103AP81534 67 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 GHRHRQ02643 423 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 IKBKEQ14164 716 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 KCNV1Q6PIU1 500 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HLA-CQ95604 372 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 C1QTNF1Q9BXJ1 281 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TTC28Q96AY4 2481 aa11.24□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PRRC2BQ5JSZ5 2229 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LCHNA4D1U4 455 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ZBTB5O15062 677 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LPXNO60711 386 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 GJB5O95377 273 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HOXD8P13378 290 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TRAF1Q13077 416 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 RABEP1Q15276 862 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 SPRED2Q7Z698 418 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 GDPD5Q8WTR4 605 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 SPATA33Q96N06 139 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 RAD9AQ99638 391 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LMCD1Q9NZU5 365 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 UNC80Q8N2C7 3258 aa11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 OPLAHO14841 1288 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 SORBS3O60504 671 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LGR5O75473 907 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 RGS20O76081 388 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 GGPS1O95749 300 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 CCND2P30279 289 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HOXA13P31271 388 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ERVK-21P61565 698 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TRDNQ13061 729 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PGM5Q15124 567 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 SEC23AQ15436 765 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TCTN1Q2MV58 587 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ZNF618Q5T7W0 954 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 RUFY2Q8WXA3 655 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 KCNB2Q92953 911 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MTMR8Q96EF0 704 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TGS1Q96RS0 853 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 RAPGEFL1Q9UHV5 662 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
CDK5RAP3-227ENST00000583352 LINC01553A4QN01 128 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 AMHP03971 560 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TGFB3P10600 412 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HSPA4P34932 840 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ANAPC15P60006 121 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 HSDL1Q3SXM5 330 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 FAM117BQ6P1L5 589 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 TRAF7Q6Q0C0 670 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 FCHSD1Q86WN1 690 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 IL31RAQ8NI17 732 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 WNT8BQ93098 351 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
CDK5RAP3-227ENST00000583352 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 ERICH2A1L162 156 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 C17orf102A2RUQ5 167 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 RSPH10B2B2RC85 870 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 RSPH10BP0C881 870 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 THPOP40225 353 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 PTH1RQ03431 593 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 MBTPS1Q14703 1052 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 GRM4Q14833 912 aa11.2□□□□□ -0.62
CDK5RAP3-227ENST00000583352 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms