RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 WTAPQ15007 396 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 SLC35G1Q2M3R5 365 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 CELF3Q5SZQ8 465 aaKnown RBP16.77■□□□□ 0.28
ITGB4-208ENST00000582629 MYSM1Q5VVJ2 828 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 NCOA7Q8NI08 942 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 PIGSQ96S52 555 aa16.77■□□□□ 0.28
ITGB4-208ENST00000582629 GGPS1O95749 300 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 CXCL10P02778 98 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 TGFB3P10600 412 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
ITGB4-208ENST00000582629 TAP1Q03518 808 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 TROAPQ12815 778 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 GPNMBQ14956 572 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 IL31RAQ8NI17 732 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
ITGB4-208ENST00000582629 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 E7EWF7 191 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 RFXAPO00287 272 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 CYTH3O43739 400 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 TLL1O43897 1013 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 NBNO60934 754 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 UBA1P22314 1058 aaKnown RBP16.75■□□□□ 0.27
ITGB4-208ENST00000582629 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 ADAMTS19Q8TE59 1207 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 ARNTL2Q8WYA1 636 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
ITGB4-208ENST00000582629 MTCH2Q9Y6C9 303 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 NCOR1O75376 2440 aa16.75■□□□□ 0.27
ITGB4-208ENST00000582629 ABHD14A-ACY1A0A1B0GW23 586 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 SGSM2O43147 1006 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 SORBS3O60504 671 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 EFCAB14O75071 495 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 SP2Q02086 613 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 TRIM71Q2Q1W2 868 aaKnown RBP16.74■□□□□ 0.27
ITGB4-208ENST00000582629 GNPTABQ3T906 1256 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
ITGB4-208ENST00000582629 COL4A4P53420 1690 aaPredicted RBP16.74■□□□□ 0.27
ITGB4-208ENST00000582629 FRMPD4Q14CM0 1322 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 STAM2O75886 525 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
ITGB4-208ENST00000582629 AAK1Q2M2I8 961 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 ZNF618Q5T7W0 954 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 TRAF7Q6Q0C0 670 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 MB21D2Q8IYB1 491 aaPredicted RBP16.73■□□□□ 0.27
ITGB4-208ENST00000582629 UHRF1Q96T88 793 aaPredicted RBP16.73■□□□□ 0.27
ITGB4-208ENST00000582629 C16orf70Q9BSU1 422 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
ITGB4-208ENST00000582629 TCF20Q9UGU0 1960 aaKnown RBP16.73■□□□□ 0.27
ITGB4-208ENST00000582629 ANTXR2P58335 489 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 DEFB103AP81534 67 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 ZNF200P98182 395 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-208ENST00000582629 IKBKEQ14164 716 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 IGDCC4Q8TDY8 1250 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
ITGB4-208ENST00000582629 WNT8BQ93098 351 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-208ENST00000582629 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 ZBED2Q9BTP6 218 aa16.72■□□□□ 0.27
ITGB4-208ENST00000582629 EMSYQ7Z589 1322 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 DOCK5Q9H7D0 1870 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 MICAL3Q7RTP6 2002 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 C17orf102A2RUQ5 167 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 DDAH1O94760 285 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 GJB5O95377 273 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 ICAM3P32942 547 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 GRB10Q13322 594 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 NEDD9Q14511 834 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 HIC1Q14526 733 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 TMCO2Q7Z6W1 182 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-208ENST00000582629 SERINC5Q86VE9 423 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
ITGB4-208ENST00000582629 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
ITGB4-208ENST00000582629 SIP14410 1827 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 H3BRB1 525 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 NOP56O00567 594 aaKnown RBP16.7■□□□□ 0.26
ITGB4-208ENST00000582629 FIBPO43427 364 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 LGR5O75473 907 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 LGALS2P05162 132 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 THPOP40225 353 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 MRPS9P82933 396 aaKnown RBP16.7■□□□□ 0.26
ITGB4-208ENST00000582629 MBTPS1Q14703 1052 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 TCTN1Q2MV58 587 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 KRT40Q6A162 431 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 METTL7BQ6UX53 244 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 ZNF654Q8IZM8 581 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
ITGB4-208ENST00000582629 PIBF1Q8WXW3 757 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 CUL5Q93034 780 aa16.7■□□□□ 0.26
ITGB4-208ENST00000582629 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
ITGB4-208ENST00000582629 INPP4AQ96PE3 977 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms