RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	RFXAP	O00287	272 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	IRS4	O14654	1257 aa	Predicted RBP	4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	FBLN1	P23142	703 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	SUMO1	P63165	101 aa	Known RBP	4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	CHRNA2	Q15822	529 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	NTRK3	Q16288	839 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	IGDCC3	Q8IVU1	814 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	ALG3	Q92685	438 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	CHAMP1	Q96JM3	812 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	DNAJC7	Q99615	494 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	RXFP1	Q9HBX9	757 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	CLDND1	Q9NY35	253 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	FBXL7	Q9UJT9	491 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	CHD1	O14646	1710 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	ARHGEF11	O15085	1522 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	IQGAP2	Q13576	1575 aa		4.65	□□□□□ -1.67
MSI2-215	ENST00000582453	BUB1B	O60566	1050 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM153B	P0C7A2	387 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	NCAM1	P13591	858 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	IGFBP6	P24592	240 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	GPR85	P60893	370 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	JAG1	P78504	1218 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	ZNF385B	Q569K4	471 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM209A	Q5JX71	171 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	FOXB2	Q5VYV0	432 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	CIAPIN1	Q6FI81	312 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	IFNL3	Q8IZI9	196 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.64	□□□□□ -1.67	1e-13	■□□□□ 8.8
MSI2-215	ENST00000582453	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	THAP3	Q8WTV1	239 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	CPA5	Q8WXQ8	436 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	EXOC2	Q96KP1	924 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	CDIP1	Q9H305	208 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	EPB41L1	Q9H4G0	881 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	SIT1	Q9Y3P8	196 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	KCTD3	Q9Y597	815 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	TNIK	Q9UKE5	1360 aa		4.64	□□□□□ -1.67
MSI2-215	ENST00000582453	PRG4	Q92954	1404 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	SGSM2	O43147	1006 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	MSC	O60682	206 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	DGKI	O75912	1065 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	ASGR2	P07307	311 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	CFP	P27918	469 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	PML	P29590	882 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	NCKAP1L	P55160	1127 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	BMS1	Q14692	1282 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	SSPN	Q14714	243 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	KIZ	Q2M2Z5	673 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	KRTAP19-4	Q3LI73	84 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	EMC4	Q5J8M3	183 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	KCNT2	Q6UVM3	1135 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	LBX2	Q6XYB7	198 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	AMIGO3	Q86WK7	504 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	C1QL4	Q86Z23	238 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM177A1	Q8N128	213 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	ZSWIM2	Q8NEG5	633 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	PTPRN2	Q92932	1015 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	MRFAP1L1	Q96HT8	127 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	DHRS4	Q9BTZ2	278 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	LNPK	Q9C0E8	428 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	PLA2G2D	Q9UNK4	145 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	ZNF652	Q9Y2D9	606 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	FAN1	Q9Y2M0	1017 aa		4.63	□□□□□ -1.67
MSI2-215	ENST00000582453	EFCAB5	A4FU69	1503 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	DISP1	Q96F81	1524 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	CCDC163	A0A0D9SF12	145 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	BLACE	A4D250	179 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	AQP7	O14520	342 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	HGS	O14964	777 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	NUAK1	O60285	661 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	MAFK	O60675	156 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	C6orf222	P0C671	652 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	PI3	P19957	117 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	GABRE	P78334	506 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	CCDC144B	Q3MJ40	725 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	C2orf27A	Q580R0	203 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	LCE3B	Q5TA77	95 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	CNKSR3	Q6P9H4	555 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	MILR1	Q7Z6M3	343 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	B3GNT8	Q7Z7M8	397 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM129C	Q86XR2	697 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	TMEM151B	Q8IW70	566 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	NLGN1	Q8N2Q7	840 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	KISS1R	Q969F8	398 aa	Predicted RBP	4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	ALG1	Q9BT22	464 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	ZSWIM4	Q9H7M6	989 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	PALD1	Q9ULE6	856 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	MRPS23	Q9Y3D9	190 aa	Known RBP	4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	ASXL2	Q76L83	1435 aa		4.62	□□□□□ -1.67
MSI2-215	ENST00000582453	KRIT1	O00522	736 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	ATF2	P15336	505 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	NAT1	P18440	290 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	GRK2	P25098	689 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	GRK3	P35626	688 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	CACNB2	Q08289	660 aa	Predicted RBP	4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	FZD5	Q13467	585 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms