RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 NOP56O00567 594 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 GJB5O95377 273 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 GGPS1O95749 300 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 ZNF286BP0CG31 522 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 BMP1P13497 986 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 COL9A1P20849 921 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 PGM5Q15124 567 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 SEC23AQ15436 765 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 HOMER1Q86YM7 354 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
CDC42EP4-208ENST00000582303 PNMA6FA0A0J9YX94 578 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 RFXAPO00287 272 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 CAND2O75155 1236 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 GNAT1P11488 350 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 GRB10Q13322 594 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 DHX38Q92620 1227 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
CDC42EP4-208ENST00000582303 LAMA4Q16363 1823 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 TANC1Q9C0D5 1861 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 H3BRB1 525 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 OPLAHO14841 1288 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 NBNO60934 754 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 LGR5O75473 907 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 AMHP03971 560 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 TFF2Q03403 129 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 NEDD9Q14511 834 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 GRM4Q14833 912 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 WTAPQ15007 396 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 HSDL1Q3SXM5 330 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 ZNF618Q5T7W0 954 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 TUT1Q9H6E5 874 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-208ENST00000582303 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 RGS20O76081 388 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 KIF5BP33176 963 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 THPOP40225 353 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 GPNMBQ14956 572 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 SERINC5Q86VE9 423 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 FCHSD1Q86WN1 690 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 ATP6V0A1Q93050 837 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 PIGSQ96S52 555 aa16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 ZNF215Q9UL58 517 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-208ENST00000582303 PPP1R11O60927 126 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 ERVK-21P61565 698 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 DEFB103AP81534 67 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 TRIM71Q2Q1W2 868 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 XRRA1Q6P2D8 792 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 GIMAP8Q8ND71 665 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 CUL5Q93034 780 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 SAMD11Q96NU1 681 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 C16orf70Q9BSU1 422 aa16.83■□□□□ 0.28
CDC42EP4-208ENST00000582303 GBF1Q92538 1859 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 FIBPO43427 364 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 ICAM3P32942 547 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 KCNQ1P51787 676 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 TROAPQ12815 778 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 METTL7BQ6UX53 244 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 SEPT8Q92599 483 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 INPP4AQ96PE3 977 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 SEC63Q9UGP8 760 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-208ENST00000582303 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 LPXNO60711 386 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 ARHGEF15O94989 841 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 LGALS2P05162 132 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 CYP21A2P08686 494 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 PTPROQ16827 1216 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 SMARCC2Q8TAQ2 1214 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 RRP36Q96EU6 259 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 CDHR1Q96JP9 859 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 MTA3Q9BTC8 594 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 SUGCTQ9HAC7 445 aa16.81■□□□□ 0.28
CDC42EP4-208ENST00000582303 FRMPD4Q14CM0 1322 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 SPATA31C2B4DYI2 1134 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 E7EWF7 191 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 SMIM10L2AP0DMW4 78 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 SMIM10L2BP0DMW5 78 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 GNAQP50148 359 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 SP2Q02086 613 aa16.8■□□□□ 0.28
CDC42EP4-208ENST00000582303 PLEKHG4Q58EX7 1191 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms