RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 AKR1B15C9JRZ8 316 aaPredicted RBP25.29■■□□□ 1.64
CCDC47-204ENST00000582252 STX10O60499 249 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 PBX1P40424 430 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 IREB2P48200 963 aaKnown RBP25.29■■□□□ 1.64
CCDC47-204ENST00000582252 TRIM14Q14142 442 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 LDHDQ86WU2 507 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 AS3MTQ9HBK9 375 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 FZD1Q9UP38 647 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 MYMKA6NI61 221 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 GCOM1H8Y6P7 765 aaPredicted RBP25.29■■□□□ 1.64
CCDC47-204ENST00000582252 POLR2MP0CAP2 368 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 POTEIP0CG38 1075 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 POTEJP0CG39 1038 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 ZNF76P36508 570 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 PRKG1Q13976 671 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 PRR16Q569H4 304 aa25.29■■□□□ 1.64
CCDC47-204ENST00000582252 BAG1Q99933 345 aaPredicted RBP25.29■■□□□ 1.64
CCDC47-204ENST00000582252 TEX33O43247 280 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 MAP3K9P80192 1104 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 CEP135Q66GS9 1140 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 TTI2Q6NXR4 508 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 NYAP1Q6ZVC0 841 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 ETNPPLQ8TBG4 499 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 LPAR1Q92633 364 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 PANX2Q96RD6 677 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 WDR18Q9BV38 432 aa25.28■■□□□ 1.64
CCDC47-204ENST00000582252 OPLAHO14841 1288 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 PTPRAP18433 802 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 ZYXQ15942 572 aaKnown RBP25.27■■□□□ 1.64
CCDC47-204ENST00000582252 E4F1Q66K89 784 aaPredicted RBP25.27■■□□□ 1.64
CCDC47-204ENST00000582252 CCDC174Q6PII3 467 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 CCDC84Q86UT8 332 aaPredicted RBP25.27■■□□□ 1.64
CCDC47-204ENST00000582252 TC2NQ8N9U0 490 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 CCDC51Q96ER9 411 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 NUDT12Q9BQG2 462 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 NAA15Q9BXJ9 866 aaKnown RBP25.27■■□□□ 1.64
CCDC47-204ENST00000582252 KIAA1683Q9H0B3 1180 aa25.27■■□□□ 1.64
CCDC47-204ENST00000582252 TRMT1Q9NXH9 659 aaKnown RBP25.27■■□□□ 1.64
CCDC47-204ENST00000582252 TRIM49BA6NDI0 452 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 USP27XA6NNY8 438 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 DYNC1I1O14576 645 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 WDR46O15213 610 aaKnown RBP25.26■■□□□ 1.63
CCDC47-204ENST00000582252 ZSCAN12O43309 604 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 STK4Q13043 487 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 CNGA4Q8IV77 575 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 CSADQ9Y600 493 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 COBLO75128 1261 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 FGFR1OPO95684 399 aaKnown RBP25.26■■□□□ 1.63
CCDC47-204ENST00000582252 PTPRFP10586 1907 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 MAP1SQ66K74 1059 aaPredicted RBP25.26■■□□□ 1.63
CCDC47-204ENST00000582252 CSGALNACT2Q8N6G5 542 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 DDX12PQ92771 950 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 SRRTQ9BXP5 876 aaKnown RBP25.26■■□□□ 1.63
CCDC47-204ENST00000582252 VPS16Q9H269 839 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 NMRK2Q9NPI5 230 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 TAB2Q9NYJ8 693 aa25.26■■□□□ 1.63
CCDC47-204ENST00000582252 CFBP00751 764 aa25.25■■□□□ 1.63
CCDC47-204ENST00000582252 HOXA13P31271 388 aaPredicted RBP25.25■■□□□ 1.63
CCDC47-204ENST00000582252 PTPN21Q16825 1174 aa25.25■■□□□ 1.63
CCDC47-204ENST00000582252 KCTD17Q8N5Z5 321 aa25.25■■□□□ 1.63
CCDC47-204ENST00000582252 PPP1R13BQ96KQ4 1090 aa25.25■■□□□ 1.63
CCDC47-204ENST00000582252 P2RX7Q99572 595 aaKnown RBP25.25■■□□□ 1.63
CCDC47-204ENST00000582252 RABGAP1Q9Y3P9 1069 aa25.25■■□□□ 1.63
CCDC47-204ENST00000582252 GOLGA6L9A6NEM1 432 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 FCER1AP12319 257 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 USP14P54578 494 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 VGLL4Q14135 290 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.24■■□□□ 1.63
CCDC47-204ENST00000582252 DYMQ7RTS9 669 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 CREBRFQ8IUR6 639 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 GUF1Q8N442 669 aaKnown RBP25.24■■□□□ 1.63
CCDC47-204ENST00000582252 ZNF280CQ8ND82 737 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 ZNF526Q8TF50 670 aaPredicted RBP25.24■■□□□ 1.63
CCDC47-204ENST00000582252 KIAA1024Q9UPX6 916 aa25.24■■□□□ 1.63
CCDC47-204ENST00000582252 IDEP14735 1019 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 GTF2F1P35269 517 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCDC47-204ENST00000582252 PMS1P54277 932 aaKnown RBP25.23■■□□□ 1.63
CCDC47-204ENST00000582252 ADKP55263 362 aaKnown RBP25.23■■□□□ 1.63
CCDC47-204ENST00000582252 TTLL12Q14166 644 aaPredicted RBP25.23■■□□□ 1.63
CCDC47-204ENST00000582252 FOXR2Q6PJQ5 311 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 ARMC9Q7Z3E5 817 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 TMEM139Q8IV31 216 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 CCDC65Q8IXS2 484 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 ANKRD13AQ8IZ07 590 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 KIAA0895Q8NCT3 520 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 LENG9Q96B70 501 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 PNMA2Q9UL42 364 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 ECM1Q16610 540 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 KCNK18Q7Z418 384 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 GJA10Q969M2 543 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 SLC39A2Q9NP94 309 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 SNCAIPQ9Y6H5 919 aa25.23■■□□□ 1.63
CCDC47-204ENST00000582252 LGALS16A8MUM7 142 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 FAM86B1E9PN63 330 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 FAM86B2P0C5J1 330 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 PLA2G4BP0C869 781 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 UBXN1Q04323 297 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 SPP2Q13103 211 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 NCAPH2Q6IBW4 605 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms