RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 FRMPD3Q5JV73 1810 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 ASGR1P07306 291 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 CYP3A4P08684 503 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 ZNF76P36508 570 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 USP11P51784 963 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 MRPS9P82933 396 aaKnown RBP11.89□□□□□ -0.51
TOP3A-212ENST00000582122 SETQ01105 290 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-212ENST00000582122 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-212ENST00000582122 KRT25Q7Z3Z0 450 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 BLIDQ8IZY5 108 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
TOP3A-212ENST00000582122 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 NAP1L4Q99733 375 aaKnown RBP11.89□□□□□ -0.51
TOP3A-212ENST00000582122 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 JADE2Q9NQC1 790 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
TOP3A-212ENST00000582122 KIAA1217Q5T5P2 1943 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-212ENST00000582122 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 ARHGAP4P98171 946 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 MTMR1Q13613 665 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
TOP3A-212ENST00000582122 DGKDQ16760 1214 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 LY6KQ17RY6 165 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 CELF3Q5SZQ8 465 aaKnown RBP11.88□□□□□ -0.51
TOP3A-212ENST00000582122 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 METTL7BQ6UX53 244 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 SLC39A5Q6ZMH5 540 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 IL31RAQ8NI17 732 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
TOP3A-212ENST00000582122 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 PHF20Q9BVI0 1012 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 KATNAL1Q9BW62 490 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-212ENST00000582122 UBIAD1Q9Y5Z9 338 aa11.88□□□□□ -0.51
TOP3A-212ENST00000582122 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-212ENST00000582122 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 NOP56O00567 594 aaKnown RBP11.87□□□□□ -0.51
TOP3A-212ENST00000582122 ADCY6O43306 1168 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 RGS20O76081 388 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 ARIH2O95376 493 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 ARHGAP1Q07960 439 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 SNX17Q15036 470 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 JAKMIP3Q5VZ66 844 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 MOXD1Q6UVY6 613 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 CCDC83Q8IWF9 413 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 LENG1Q96BZ8 264 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-212ENST00000582122 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 MTG1Q9BT17 334 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-212ENST00000582122 PRKAG2Q9UGJ0 569 aa11.87□□□□□ -0.51
TOP3A-212ENST00000582122 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
TOP3A-212ENST00000582122 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 MEIS1O00470 390 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 CTAGE5O15320 804 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 TLR3O15455 904 aaKnown RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 LARGE1O95461 756 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 GGPS1O95749 300 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 HOXD8P13378 290 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 UBA1P22314 1058 aaKnown RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 CIITAP33076 1130 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 KRT2P35908 639 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 PTPN11Q06124 597 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 CRYGNQ8WXF5 182 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
TOP3A-212ENST00000582122 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 SPATA33Q96N06 139 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 SDF4Q9BRK5 362 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 RTEL1Q9NZ71 1219 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 COL6A3P12111 3177 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 NFASCO94856 1347 aa11.86□□□□□ -0.51
TOP3A-212ENST00000582122 MYADML2A6NDP7 307 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 ARVCFO00192 962 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-212ENST00000582122 PPFIA3O75145 1194 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 MMP3P08254 477 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 MYL3P08590 195 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 SUPT20HL2P0C7V6 817 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
TOP3A-212ENST00000582122 ITGB5P18084 799 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 BMP8BP34820 402 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
TOP3A-212ENST00000582122 BEX3Q00994 111 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 CXCL17Q6UXB2 119 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 ANKRD33Q7Z3H0 272 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 AFG1LQ8WV93 481 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms