RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 KLHL36Q8N4N3 616 aa7.46□□□□□ -1.22
SMCHD1-207ENST00000581711 X6R8D5 127 aa7.46□□□□□ -1.22
SMCHD1-207ENST00000581711 CYP7B1O75881 506 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 EIF6P56537 245 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 COL9A2Q14055 689 aaPredicted RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 Q8TCH9 128 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 TOE1Q96GM8 510 aaKnown RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 GINM1Q9NU53 330 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 FTSJ1Q9UET6 329 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 CROTQ9UKG9 612 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 TIMM13Q9Y5L4 95 aaPredicted RBP7.45□□□□□ -1.22
SMCHD1-207ENST00000581711 GIPRP48546 466 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 FANCCQ00597 558 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 CEP68Q76N32 757 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 TRMT2BQ96GJ1 504 aaKnown RBP7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 ZNF341Q9BYN7 854 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 DTLQ9NZJ0 730 aa7.44□□□□□ -1.22
SMCHD1-207ENST00000581711 RBM25P49756 843 aaKnown RBP7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 NFATC3Q12968 1075 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 GTF2IRD2BQ6EKJ0 949 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 KIAA1211LQ6NV74 962 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 TEPPQ6URK8 271 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 GTF2IRD2Q86UP8 949 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 ARRDC4Q8NCT1 418 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 BVESQ8NE79 360 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 OR6P1Q8NGX9 317 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 NPLOC4Q8TAT6 608 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 WRNIP1Q96S55 665 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 TMEM209Q96SK2 561 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 ZDHHC9Q9Y397 364 aa7.43□□□□□ -1.22
SMCHD1-207ENST00000581711 NPIPB8E9PQR5 432 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 SOX9P48436 509 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 RACK1P63244 317 aaKnown RBP7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 FHL2Q14192 279 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 IQCEQ6IPM2 695 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 CYP26B1Q9NR63 512 aa7.42□□□□□ -1.22
SMCHD1-207ENST00000581711 HGSO14964 777 aaPredicted RBP7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 BCL6P41182 706 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 TGFB2P61812 414 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 CHRNA2Q15822 529 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 PPP2R5EQ16537 467 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 TRMT10BQ6PF06 316 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 CCDC103Q8IW40 242 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 TMEM169Q96HH4 297 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 NKX2-4Q9H2Z4 354 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 EFR3BQ9Y2G0 817 aa7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 COA3Q9Y2R0 106 aaPredicted RBP7.41□□□□□ -1.22
SMCHD1-207ENST00000581711 TCRBV5S2A0A599 114 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 NOP56O00567 594 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 LRG1P02750 347 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 VAMP1P23763 118 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 GTF2A2P52657 109 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 VHLLQ6RSH7 139 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 METTL5Q9NRN9 209 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 C11orf21Q9P2W6 132 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 DDX41Q9UJV9 622 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 ADAM29Q9UKF5 820 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
SMCHD1-207ENST00000581711 CNOT4O95628 575 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 PAK2Q13177 524 aa7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 FOXE3Q13461 319 aa7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 DIO2Q92813 273 aa7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 APBA2Q99767 749 aa7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 TMEFF2Q9UIK5 374 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-207ENST00000581711 MYO1BO43795 1136 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 COL6A1P12109 1028 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 HS1BP3Q53T59 392 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 MIIPQ5JXC2 388 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 STEAP3Q658P3 488 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 TMC5Q6UXY8 1006 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 MRGPRX3Q96LB0 322 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 GNRHR2Q96P88 292 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 LGR4Q9BXB1 951 aa7.38□□□□□ -1.23
SMCHD1-207ENST00000581711 ARNTLO00327 626 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 FOXS1O43638 330 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 TADA3O75528 432 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 PRKD1Q15139 912 aaPredicted RBP7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 EMC4Q5J8M3 183 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 RNF207Q6ZRF8 634 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 SPATA32Q96LK8 384 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 SEC61A2Q9H9S3 476 aa7.37□□□□□ -1.23
SMCHD1-207ENST00000581711 NAT2P11245 290 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 TGM1P22735 817 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 ZNF143P52747 638 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 CASP7P55210 303 aa7.36□□□□□ -1.23
SMCHD1-207ENST00000581711 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms