RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SPATA31C2B4DYI2 1134 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 CSF2RAP15509 400 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 ICAM3P32942 547 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 NAPAP54920 295 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 PTPN11Q06124 597 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-220ENST00000581707 RUFY3Q7L099 469 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 KAT2BQ92831 832 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 SPATA33Q96N06 139 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 NOC4LQ9BVI4 516 aaKnown RBP22.4■■□□□ 1.18
SREBF1-220ENST00000581707 MLXIPQ9HAP2 919 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 ZSWIM6Q9HCJ5 1215 aa22.4■■□□□ 1.18
SREBF1-220ENST00000581707 SPDYE3A6NKU9 549 aa22.39■■□□□ 1.17
SREBF1-220ENST00000581707 PPFIA4O75335 1185 aa22.39■■□□□ 1.17
SREBF1-220ENST00000581707 HSDL1Q3SXM5 330 aa22.39■■□□□ 1.17
SREBF1-220ENST00000581707 PPP1R18Q6NYC8 613 aa22.39■■□□□ 1.17
SREBF1-220ENST00000581707 RNPC3Q96LT9 517 aaKnown RBP22.39■■□□□ 1.17
SREBF1-220ENST00000581707 CYP46A1Q9Y6A2 500 aa22.39■■□□□ 1.17
SREBF1-220ENST00000581707 UMODL1Q5DID0 1318 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 hCG_1984214I3L0E3 225 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 FIBPO43427 364 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 CYP2C9P11712 490 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 TYW1BQ6NUM6 668 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 ZNF713Q8N859 430 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-220ENST00000581707 TM6SF1Q9BZW5 370 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 RIC8AQ9NPQ8 531 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 BARHL2Q9NY43 387 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 PCDHA6Q9UN73 950 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 PCDHA8Q9Y5H6 950 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 NID2Q14112 1375 aa22.38■■□□□ 1.17
SREBF1-220ENST00000581707 STXBP3O00186 592 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 ZNF286BP0CG31 522 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 HOXD8P13378 290 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-220ENST00000581707 CCL23P55773 120 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 SEMA3FQ13275 785 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 NEDD9Q14511 834 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 C16orf59Q7L2K0 433 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 NLRX1Q86UT6 975 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 TEX2Q8IWB9 1127 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.37■■□□□ 1.179e-12■■□□□ 13
SREBF1-220ENST00000581707 KATNAL1Q9BW62 490 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 BCAS3Q9H6U6 928 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 EHMT1Q9H9B1 1298 aa22.37■■□□□ 1.17
SREBF1-220ENST00000581707 SMCO2A6NFE2 343 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 F2P00734 622 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 PSEN2P49810 448 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 ADCY7P51828 1080 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 EVCP57679 992 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 PFKFB3Q16875 520 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-220ENST00000581707 TMEM240Q5SV17 173 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 SESTD1Q86VW0 696 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 IL23AQ9NPF7 189 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 NOD1Q9Y239 953 aa22.36■■□□□ 1.17
SREBF1-220ENST00000581707 DOCK5Q9H7D0 1870 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 ACRP10323 421 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 SCG2P13521 617 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 PDIA3P30101 505 aaKnown RBP22.35■■□□□ 1.17
SREBF1-220ENST00000581707 MFSD10Q14728 455 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 METTL7BQ6UX53 244 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 CYFIP1Q7L576 1253 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 DEFB123Q8N688 67 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 C7orf31Q8N865 590 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 SENP7Q9BQF6 1050 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 ALG1Q9BT22 464 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 UPF3BQ9BZI7 483 aaKnown RBP22.35■■□□□ 1.17
SREBF1-220ENST00000581707 GLT8D2Q9H1C3 349 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 WNT8AQ9H1J5 351 aa22.35■■□□□ 1.17
SREBF1-220ENST00000581707 HAS3O00219 553 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 NOP56O00567 594 aaKnown RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 PRPF3O43395 683 aaKnown RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 FOSP01100 380 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 CCT2P78371 535 aaKnown RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 TOB2Q14106 344 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 PTGISQ16647 500 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 KIAA0753Q2KHM9 967 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 GDF6Q6KF10 455 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 PSRC1Q6PGN9 363 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-220ENST00000581707 ZNF365Q70YC5 407 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 GPRASP2Q96D09 838 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 CDHR1Q96JP9 859 aa22.34■■□□□ 1.17
SREBF1-220ENST00000581707 ITGB5P18084 799 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 SMAD3P84022 425 aaKnown RBP22.33■■□□□ 1.17
SREBF1-220ENST00000581707 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.17
SREBF1-220ENST00000581707 NTRK3Q16288 839 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 Q7L0L9 218 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 RPUSD2Q8IZ73 545 aaKnown RBP22.33■■□□□ 1.17
SREBF1-220ENST00000581707 GIMAP8Q8ND71 665 aaPredicted RBP22.33■■□□□ 1.17
SREBF1-220ENST00000581707 PHKBQ93100 1093 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 SCLYQ96I15 445 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 HDAC6Q9UBN7 1215 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 UBIAD1Q9Y5Z9 338 aa22.33■■□□□ 1.17
SREBF1-220ENST00000581707 PKN1Q16512 942 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 FAM109BQ6ICB4 259 aaPredicted RBP22.32■■□□□ 1.16
SREBF1-220ENST00000581707 RETREG2Q8NC44 543 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 GPR20Q99678 358 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 C16orf70Q9BSU1 422 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 NCOA5Q9HCD5 579 aaKnown RBP22.32■■□□□ 1.16
SREBF1-220ENST00000581707 PDRG1Q9NUG6 133 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 GTF2IRD1Q9UHL9 959 aa22.32■■□□□ 1.16
SREBF1-220ENST00000581707 TRIP12Q14669 1992 aaPredicted RBP22.31■■□□□ 1.16
SREBF1-220ENST00000581707 PITPNM1O00562 1244 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms